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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5v88A_

Fold library idPDB HeaderMoleculeTitle
c5v88A_1.60PDB header: ligase / protein bindingChain: A: PDB Molecule: lysozyme,dcn1-like protein 1;


Added to library: Sat May 27 08:25:29 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SQDLENLYFQGSMNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVI
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Known secondary structure (DSSP)


GGGGTTS
SS
T


SSS
TTS
S
TS

TTB
 .........80.........90.........100.........110.........120.........130.........140
Sequence TKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWAE
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Known secondary structure (DSSP)

TTTS
T
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AAVNLAKSRWYNQTPNRTKRVITTFATGTWDAYKNLRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLAL
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Known secondary structure (DSSP) TTSSSSSTT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFA
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Known secondary structure (DSSP)
TTSTT
S
TT

BT
SSTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLESIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVL
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Known secondary structure (DSSP) S
TT
SSB
STTT
TT

B


TT
TT

TTS


 .........360...
Sequence IDDFVEFARPQIA
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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