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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5v6rB_

Fold library idPDB HeaderMoleculeTitle
c5v6rB_2.70PDB header: protein bindingChain: B: PDB Molecule: plexin-d1;


Added to library: Sat Jun 3 08:24:13 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GIPFLEYKHFVTRTFFPTHPLLGEWNIPEHCRPSMEEGISLFSSLLNNKHFLIVFVHALEQQKDFAVRDR
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Known secondary structure (DSSP)


B




GGGTS




TTST
TT
TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence CSLASLLTIALHGKLEYYTSIMKELLVDLIDASAAKNPKLMLRRTESVVEKMLTNWMSICMYGCLRETVG
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Known secondary structure (DSSP) TGGGTTTS
GGGTT
S

STTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence EPFFLLLCAIKQQINKGSIDAITGKARYTLNEEWLLRENIEAKPRNLNVSFQDSLSVRAMDTDTLTQVKE
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Known secondary structure (DSSP) TS
B
SSS

BSS
SSGGGB

S






TT
B
 .........220.........230.........240.........250.........260.........270.........280
Sequence KILEAFCKNVPYSQWPRAEDVDLEWFASSTQSYVLRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLT
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Known secondary structure (DSSP) TTTS
GGG


GGGSSSS


SSSSS

B
SS


BTTTTT

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence DTEKYFHLVVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIREDKPPLAVKYFFDFLEEQAEKRGISDPDT
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Known secondary structure (DSSP)


SS




TS

TTS

T


 .........360.........370.........380.........390.........400.........410.........420
Sequence LHIWKTNSLPLRFWVNILKNPQFVFDIEKTDHIDACLSVIAQAFIDACSISKLLYAKEIPEYRKTVQRYY
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Known secondary structure (DSSP) TTTTT
GGGTB




S



TTTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence KQIQDMTPLSEQEMNAHLAEESRKYQNEFNTNVAMAEIYKYAKRYRPQIMAALEANPTARRTQLQHKFEQ
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Known secondary structure (DSSP) TS



TTTTS
TSTT
 .........500...
Sequence VVALMENNIYECY
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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