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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5uz9D_

Fold library idPDB HeaderMoleculeTitle
c5uz9D_3.40PDB header: immune system/rnaChain: D: PDB Molecule: crispr-associated protein csy3;


Added to library: Sat Apr 29 08:15:54 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPN
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Known secondary structure (DSSP)



S


SS


TTS
TTTTS

B









S



TS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANA
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Known secondary structure (DSSP)
B

TT




TT

SS
SS
STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVA
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Known secondary structure (DSSP) TTSSSSSSS
S

SSSS
S


TTTS
SS




TTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPY
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Known secondary structure (DSSP)

TT
B



B



TTS
STT
SSB
B
TT
T





SS
SSS





SS
 .........290.........300.........310.........320.........330...
Sequence GSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGE
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Known secondary structure (DSSP)
TTTT
S
TTTT
STS








Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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