Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5uz4Z_

Fold library idPDB HeaderMoleculeTitle
c5uz4Z_5.80PDB header: ribosome/hydrolaseChain: Z: PDB Molecule: small ribosomal subunit biogenesis gtpase rsga;


Added to library: Sat Apr 22 08:23:24 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVT
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)


STTT
SSS


TTTTS

TTSS


T
 .........80.........90.........100.........110.........120.........130.........140
Sequence GDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYL
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) T
STTTS







SS

SSS

S
S


SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence VACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQ
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) TT



GGG

TTTTT




TTT

STTT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence SGVGKSSLLNALLGLQKEILTNDISDARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGL
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) TTSSS
SS


S
SSS


B
SSS


TTTTS






SSSTTTSSTTSSS
 .........290.........300.........310.........320...
Sequence CKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQV
Predicted secondary structure



















SS confidence










































Known secondary structure (DSSP)
SSTT

SSS
TT
STTTSS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D