PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5uvdA_

Fold library id	PDB Header	Molecule	Title
c5uvdA_	1.86	PDB header: transferase	Chain: A: PDB Molecule: nucleotidyltransferase-like protein;

Links to external resources
Added to library: Sat Feb 3 08:20:35 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A P L S S D E L K T V V S V L A Q K L D S L N I D Y A I M G G A A T C L L S G D P N R R T E D V D L V I H V D H R K I T A D N L T T Q L L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T
S
T T
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S F P S D F E G V S Q F G H T I P A Y K L R R P G G T V Q L V E L E V F D Y Q S W P Q R P Q Y D L Q T A T R T T L N I N G Q K V K L F S P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S S S
T T S
T T T
T T
G G G
T T T S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence W I L R E K I L S Q Y Q R Q G S R K E G T D I R D I I S M I P L A V P G K P E L N F N Q S Q E L Q T A L A N L V Q K R P D L S S A L K A K I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S T T G G G
T T
G G G B
T T
G G G T T

. . . . . . . .

Sequence K C S A V F H N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	P	L	S	S	D	E	L	K	T	V	V	S	V	L	A	Q	K	L	D	S	L	N	I	D	Y	A	I	M	G	G	A	A	T	C	L	L	S	G	D	P	N	R	R	T	E	D	V	D	L	V	I	H	V	D	H	R	K	I	T	A	D	N	L	T	T	Q	L	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T														T		S		T	T				S	S									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	F	P	S	D	F	E	G	V	S	Q	F	G	H	T	I	P	A	Y	K	L	R	R	P	G	G	T	V	Q	L	V	E	L	E	V	F	D	Y	Q	S	W	P	Q	R	P	Q	Y	D	L	Q	T	A	T	R	T	T	L	N	I	N	G	Q	K	V	K	L	F	S	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T						S	S	S											T	T	S												T	T	T		T	T		G	G	G		T	T	T	S								T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	W	I	L	R	E	K	I	L	S	Q	Y	Q	R	Q	G	S	R	K	E	G	T	D	I	R	D	I	I	S	M	I	P	L	A	V	P	G	K	P	E	L	N	F	N	Q	S	Q	E	L	Q	T	A	L	A	N	L	V	Q	K	R	P	D	L	S	S	A	L	K	A	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	T	S	T	T												G	G	G			T	T		G	G	G	B		T	T																G	G	G						T	T
	.	.	.	.	.	.	.	.
Sequence	K	C	S	A	V	F	H	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B