PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5un02_

Fold library id	PDB Header	Molecule	Title
c5un02_	3.00	PDB header: apoptosis	Chain: 2: PDB Molecule: proteasome assembly chaperone 2 (pac2) homologue rv2125;

Links to external resources
Added to library: Mon Mar 6 12:02:51 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M V V V A A F E G W N D A G D A A G D A V A H L A A S W Q A L P I V E I D D E A Y Y D Y Q V N R P V I R Q V D G V T R E L Q W P A M R I S H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
S T T T T
T T S
T T T S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence C R P P G S D R D V V L M C G V E P N M R W R T F C D E L L A V I D K L N V D T V V I L G A L L A D T P H T R P V P V S G A A Y S A A S A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
S S
T T
S
S S S
S S T T G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q F G L Q E T R Y E G P T G I A G V F Q S A C V G A G I P A V T F W A A V P H Y V S H P P N P K A T I A L L R R V E D V L D V E V P L A D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G
S S
S
S S S
T
T T
S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . .

Sequence P A Q A E A W E R E I T E T I A E D H E L A E Y V Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	V	V	V	A	A	F	E	G	W	N	D	A	G	D	A	A	G	D	A	V	A	H	L	A	A	S	W	Q	A	L	P	I	V	E	I	D	D	E	A	Y	Y	D	Y	Q	V	N	R	P	V	I	R	Q	V	D	G	V	T	R	E	L	Q	W	P	A	M	R	I	S	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G		S	T	T													T	T										T	T	S			T	T	T	S								T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	C	R	P	P	G	S	D	R	D	V	V	L	M	C	G	V	E	P	N	M	R	W	R	T	F	C	D	E	L	L	A	V	I	D	K	L	N	V	D	T	V	V	I	L	G	A	L	L	A	D	T	P	H	T	R	P	V	P	V	S	G	A	A	Y	S	A	A	S	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S		S												S	S																T	T													S			S	S	S									S	S	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	F	G	L	Q	E	T	R	Y	E	G	P	T	G	I	A	G	V	F	Q	S	A	C	V	G	A	G	I	P	A	V	T	F	W	A	A	V	P	H	Y	V	S	H	P	P	N	P	K	A	T	I	A	L	L	R	R	V	E	D	V	L	D	V	E	V	P	L	A	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G		S	S			S		S	S	S																T												T	T				S																								T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Sequence	P	A	Q	A	E	A	W	E	R	E	I	T	E	T	I	A	E	D	H	E	L	A	E	Y	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S		S	S		T