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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ujaA_

Fold library idPDB HeaderMoleculeTitle
c5ujaA_3.34PDB header: protein transportChain: A: PDB Molecule: bovine multidrug resistance protein 1 (mrp1),multidrug


Added to library: Wed Mar 1 02:24:18 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)
TTT




 .........80.........90.........100.........110.........120.........130.........140
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNPCPESSASFLSRI
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Known secondary structure (DSSP)

GGGTT




B
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence TFWWITGMMVQGYRQPLESTDLWSLNKEDTSEQVVPVLVKNWKKECAKSFKVLYKTFGPYFLMSFLFKAV
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Known secondary structure (DSSP) TGGGS


SSSS
B

TTSS

TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence HDLMMFAGPEILKLLINFVNDKKAPEWQGYFYTALLFISACLQTLVLHQYFHICFVSGMRIKTAVIGAVY
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Known secondary structure (DSSP)

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RKALVITNAARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYLLWLNLGPSVLAGVAVMV
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Known secondary structure (DSSP) TTB
TT
GGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence LMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFKDKVLAIRQEELKVLKKSAY
Predicted secondary structure


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Known secondary structure (DSSP) STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LAAVGTFTWVCTPFLVALSTFAVYVTVDENNILDAQKAFVSLALFNILRFPLNILPMVISSIVQASVSLK
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Known secondary structure (DSSP)
SS



 .........500.........510.........520.........530.........540.........550.........560
Sequence RLRVFLSHEDLDPDSIQRRSITVKNATFTWARNDPPTLHGITFSVPEGSLVAVVGQVGCGKSSLLSALLA
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Known secondary structure (DSSP) TS
B

GGGS



SSSSS

SS

SS

SSSSSTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence EMDKVEGHVTVKGSVAYVPQQAWIQNISLRENILFGRQLQERYYKAVVEACALLPDLEILPSGDRTEIGE
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Known secondary structure (DSSP)
S
S

SS



SS
TTS


TT
TSTT
SS


ST
 .........640.........650.........660.........670.........680.........690.........700
Sequence KGVNLSGGQKQRVSLARAVYCDSDVYLLDDPLSAVDAHVGKHIFENVIGPKGLLKNKTRLLVTHAISYLP
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Known secondary structure (DSSP) TS



T

S




S
TTSSSSS
SSS
S

S
ST
 .........710.........720.........730.........740.........750.........760.........770
Sequence QMDVIIVMSGGKISEMGSYQELLARDGAFAEFLRQVKLSVYWDYMKAIGLFISFLSIFLFLCNHVASLVS
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Known secondary structure (DSSP) TSSSSS

TS

T




 .........780.........790.........800.........810.........820.........830.........840
Sequence NYWLSLWTDDPIVNGTQEHTQVRLSVYGALGISQGITVFGYSMAVSIGGIFASRRLHLDLLHNVLRSPIS
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Known secondary structure (DSSP) TS



SSS
S
S
 .........850.........860.........870.........880.........890.........900.........910
Sequence FFERTPSGNLVNRFSKELDTVDSMIPQVIKMFMGSLFNVIGACIIILLATPMAAVIIPPLGLIYFFVQRF
Predicted secondary structure
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Known secondary structure (DSSP) S

GGGGGG
 .........920.........930.........940.........950.........960.........970.........980
Sequence YVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIRQSDLKVDENQKAYYPSIVANRWLAVR
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Known secondary structure (DSSP) ST
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LECVGNCIVLFASLFAVISRHSLSAGLVGLSVSYSLQVTTYLNWLVRMSSEMETNIVAVERLKEYSETEK
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Known secondary structure (DSSP) TTTTS
TTTTSSS

 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence EAPWQIQDMAPPKDWPQVGRVEFRDYGLRYREDLDLVLKHINVTIDGGEKVGIVGRTGAGKSSLTLGLFR
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Known secondary structure (DSSP)


S


SS


S
TTT



BSSSSS
B



B


SS


TTS
TTTT
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence IKESAEGEIIIDDINIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWTSLELAHLKGFV
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Known secondary structure (DSSP) SS

STTTTTS
S

SS



S
TT

S
TT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence SALPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFDDCTVL
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Known secondary structure (DSSP) STTGGG

TTTTSS


S

B
SSSS

SSSSS
 .........1270.........1280.........1290.....
Sequence TIAHRLNTIMDYTRVIVLDKGEIQEWGSPSDLLQQ
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Known secondary structure (DSSP)
S
TTSS
SSS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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