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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5uj9A_

Fold library idPDB HeaderMoleculeTitle
c5uj9A_3.49PDB header: transport proteinChain: A: PDB Molecule: bovine multidrug resistance protein 1 (mrp1),multidrug


Added to library: Wed Mar 1 01:15:33 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)
SSSS



 .........80.........90.........100.........110.........120.........130.........140
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNPCPESSASFLSRI
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Known secondary structure (DSSP)

TTTT






TTTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TFWWITGMMVQGYRQPLESTDLWSLNKEDTSEQVVPVLVKNWKKECAKSFKVLYKTFGPYFLMSFLFKAV
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Known secondary structure (DSSP) T
TTS


SSSS



SSSST

GGGGGSST
 .........220.........230.........240.........250.........260.........270.........280
Sequence HDLMMFAGPEILKLLINFVNDKKAPEWQGYFYTALLFISACLQTLVLHQYFHICFVSGMRIKTAVIGAVY
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Known secondary structure (DSSP)
SS

 .........290.........300.........310.........320.........330.........340.........350
Sequence RKALVITNAARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYLLWLNLGPSVLAGVAVMV
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Known secondary structure (DSSP) B

TTGGGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence LMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFKDKVLAIRQEELKVLKKSAY
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Known secondary structure (DSSP) STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LAAVGTFTWVCTPFLVALSTFAVYVTVDENNILDAQKAFVSLALFNILRFPLNILPMVISSIVQASVSLK
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Known secondary structure (DSSP) S
TT



 .........500.........510.........520.........530.........540.........550.........560
Sequence RLRVFLSHEDLDPDSIQRRSITVKNATFTWARNDPPTLHGITFSVPEGSLVAVVGQVGCGKSSLLSALLA
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Known secondary structure (DSSP) T

B

TTSB



SSSSS

S
SS

SSSSSTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence EMDKVEGHVTVKGSVAYVPQQAWIQNISLRENILFGRQLQERYYKAVVEACALLPDLEILPSGDRTEIGE
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Known secondary structure (DSSP)
S
S

SS



SS
TS



T
TSTT
SS


SS
 .........640.........650.........660.........670.........680.........690.........700
Sequence KGVNLSGGQKQRVSLARAVYCDSDVYLLDDPLSAVDAHVGKHIFENVIGPKGLLKNKTRLLVTHAISYLP
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Known secondary structure (DSSP) SSS




S




S
TTSTTSS
SSS

S

SSGG
 .........710.........720.........730.........740.........750.........760.........770
Sequence QMDVIIVMSGGKISEMGSYQELLARDGAFAEFLRQVKLSVYWDYMKAIGLFISFLSIFLFLCNHVASLVS
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Known secondary structure (DSSP) GSSSSSS
S
TT
S




 .........780.........790.........800.........810.........820.........830.........840
Sequence NYWLSLWTDDPIVNGTQEHTQVRLSVYGALGISQGITVFGYSMAVSIGGIFASRRLHLDLLHNVLRSPIS
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Known secondary structure (DSSP) T



SSS
S
TS
 .........850.........860.........870.........880.........890.........900.........910
Sequence FFERTPSGNLVNRFSKELDTVDSMIPQVIKMFMGSLFNVIGACIIILLATPMAAVIIPPLGLIYFFVQRF
Predicted secondary structure
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Known secondary structure (DSSP) S

GGGGGG
 .........920.........930.........940.........950.........960.........970.........980
Sequence YVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIRQSDLKVDENQKAYYPSIVANRWLAVR
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Known secondary structure (DSSP) TTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LECVGNCIVLFASLFAVISRHSLSAGLVGLSVSYSLQVTTYLNWLVRMSSEMETNIVAVERLKEYSETEK
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Known secondary structure (DSSP) TTTTS
TTTTTTS

 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence EAPWQIQDMAPPKDWPQVGRVEFRDYGLRYREDLDLVLKHINVTIDGGEKVGIVGRTGAGKSSLTLGLFR
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Known secondary structure (DSSP)


S


SS


S
TTT




BSSSSS
BSS


SS


TT
SST
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence IKESAEGEIIIDDINIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWTSLELAHLKGFV
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Known secondary structure (DSSP) SS

SSSTTTTTS
S



SS



S
SS

S
TT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence SALPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFDDCTVL
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Known secondary structure (DSSP) SSSSS


TTTTSS


SSTTSSS
SST
SS
 .........1270.........1280.........1290.....
Sequence TIAHRLNTIMDYTRVIVLDKGEIQEWGSPSDLLQQ
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Known secondary structure (DSSP)

STTSS
SS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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