Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5uj7C_

Fold library idPDB HeaderMoleculeTitle
c5uj7C_3.39PDB header: dna binding proteinChain: C: PDB Molecule: origin recognition complex subunit 4;


Added to library: Sat Feb 11 11:19:38 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKELME
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)
TTTT
SS



S
TSS



TTSST
 .........80.........90.........100.........110.........120.........130.........140
Sequence IEEVSENVLQVHLNGLLQINDKIALKEITRQLNLENVVGDKVFGSFAENLSFLLEACPVIFILDEFDLFA
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) S
TTT

STT
TTS
SS


SST


ST
 .........150.........160.........170.........180.........190.........200.........210
Sequence HHKNQTLLYNLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLS
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP) TSSS
T




TTGGGGS
S
TT





S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LPAEVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAVDLMEASQLC
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP)




S
TT


T
BTTB
S

 .........290.........300.........310.........320.........330.........340.........350
Sequence SMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRKAHSVYNFEKPVVMKAFEHL
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP)

T

TTS

B
TTSSS
SS


 .........360.........370.........380.........390....
Sequence QQLELIKPMEYQLMKLLLDNTQIMNALQKYPNCPTDVRQWATSS
Predicted secondary structure

















SS confidence











































Known secondary structure (DSSP) TTS


S

S

TT

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D