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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5uj6A_

Fold library idPDB HeaderMoleculeTitle
c5uj6A_1.90PDB header: hydrolaseChain: A: PDB Molecule: glycosyl hydrolases family 2, sugar binding domain protein;


Added to library: Sat Jul 1 08:56:13 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QRQTQTINDSWKFLKGECTAAADSAFDDSKWTSIHLPHTWNTDAYTEKDYYRGTGWYRRQLTLPQGWKEK
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Known secondary structure (DSSP)



SSS

TTTT
TT


TTS
SS

S
GGGGT
SS


S


GGGTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence QIILRLDAAGKSATIYINGKNVGEHAGGYTACSFNITPFLSFDTPNTLAVCVDNARQDIAPISGDFTFFG
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Known secondary structure (DSSP) S

BSTT
SSS

GGG

SSS
S

TTSS
SS
SS



 .........150.........160.........170.........180.........190.........200.........210
Sequence GIYRDVWLTAVPNQHFNLTNHGSDGLFISTPQVSEEQATLSIRGEVKNDAPEKATLELTHTIYRPDGTLL
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Known secondary structure (DSSP) B

S

S


STTS
S
S
B
SS


SSS

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QTLKKNIQLKAGETYAFSNEATPVLKPELWTPETPRLYRVETTLRNRKTKTLLDQSNHYTAFRWFRFDGD
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Known secondary structure (DSSP)
TT



S

BB
SSSB

TTT


B

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence EGFFLNGKPYKLRGICRHQDQKPIGPALTDEMHRRDFLLMKEMGANFIRISHYPQDDALLEMCDKLGMLA
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Known secondary structure (DSSP) TTT




BTTTBT


TT


SS


TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence WEEIPIIDIVPNTPGYGDNCERNLREMIRQHYNHPSIITWGYMNEILLVTQRKYKTEAELKPVLERTLAL
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Known secondary structure (DSSP) S




TTTTT
TTSTT

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence ANRLERVLKEEDSTRISTMAFHGSNSYNETGLSKITDIVGWNLYQGWYGGDLTGFEKFLAQQHQNHPTHP
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Known secondary structure (DSSP)
SSS
S
TTSGGGSSS

TTTSSS
TT
TTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence MIVSEYGAGSDKRLHSLHPRAFDFSIEYQQKYLEHYLPVLEDTPYICGGTHWNFIDFSSALRDESMPRIN
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Known secondary structure (DSSP)





TTSS

TTS


TTS
SB

TT

TTSTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence NKGLVYADRTPKDVYHYYQAAWRKDIPVLHIASRDWTDRAGVQQGNAPVYLPVKIYTNLSEVELFIDGIS
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Known secondary structure (DSSP)


SB
TTS
B
TT

SS

TTT

STT

SSSTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence LGKQKTENYTATFEVPFSNRNPFLFAQGNYQGKTVQDGLRINFTPIPACLDANNLKGLELAVNVGSQCFF
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Known secondary structure (DSSP)
BTT
SSS
TT
SS

TTTTTT

TT
S
 .........710.........720.........730.........740.........750.........760.........770
Sequence TSDESQLTWLPDQPYAAGSWGYIGGKEGTAQTEIQNTADGPLFQTLRNEIEGYRFDAPQGVYEIELLFTD
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Known secondary structure (DSSP)
TTT



B

TTSS


S

BT
S
ST




S

 .........780.........790.........800.........810.........820.........830........
Sequence IFRRESTFGISINGEVVEESLSPCKESGYFRALRKKYYITNDKEYIDIRFHSTSGTCFLNGIKLRNIY
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Known secondary structure (DSSP)





TT

TTB

SSSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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