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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ui5I_

Fold library idPDB HeaderMoleculeTitle
c5ui5I_3.40PDB header: transcription/dnaChain: I: PDB Molecule: rna polymerase sigma factor rpon;


Added to library: Tue Feb 28 11:20:09 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ELEELQQNIKLELEGKEQELALELLNYLNEKGFLSKSVEEISDVLRCSVEELEKVRQKVLRLEPLGVCSK
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Known secondary structure (DSSP)


T
S


TTS

SS
T

TTSSSTT
S

 .........80.........90.........100.........110.........120.........130.........140
Sequence DVWEFLELQIEEIYPEEEEILKKALRDLKRGKKLKPEIKGKLSRLRLFPSAEKVYTFAKVDAIIEEENGE
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Known secondary structure (DSSP) ST

SST




GGGS
S





S


S

S

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FFIYLYEDFIDIDLNEEYWELYKNLQKELKEAFERYESIRKVLDIRRRNLRKVLEKIVERQKDFLTGKGS
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Known secondary structure (DSSP)
SGGG





TT

SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence LKPLTLREVSSEIGIHESTLSRIVNSKYVKTPVGTYSLRTFFVRESAEGLTQGELMKLIKEIVERKPYSD
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Known secondary structure (DSSP)




TTSSS



SS

SSTT




SSS




S

S
 .........290.........300.........310......
Sequence QEIANILKEKGFKVARRTVAKYREMLGIPSSRERRI
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Known secondary structure (DSSP) TT



SS
S
TTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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