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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5u90A_

Fold library idPDB HeaderMoleculeTitle
c5u90A_1.90PDB header: oxidoreductaseChain: A: PDB Molecule: carotenoid oxygenase 1;


Added to library: Sat Jun 3 08:23:53 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LPPAPRYFQGENTAGFMRPVRFEGDITNLEVVGEIPKSIEGTFYRVMPEPHLPSFIPNDPWFNGDGNISG
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SS

SGGGSGGGS





S



TT



SS

SSTT

GGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FYFKDGHVDLKQRYVRTEKFVREAEARRSLLGKYRNRYTDLVEFKIRSTANTNIVYWRGQLLALKEDSPP
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Known secondary structure (DSSP) TT


TS



STT
GGG
SS

S





STT
TTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence YAMDPETLETFGVYDFDGQLPSLTFTAHPKFDPVTREMVCFGYEAKGDGTRDICYYSFGPDGKIAETVWL
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Known secondary structure (DSSP)
TTT



TTTT

SS


S


TTT

SSTTSTT


TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VSPVCGMIHDFAVTENFVIFPIIPLVCDVERMKQGGDHWQWDYSIPMYIGVLPRRGAQGSDVKWFEAPHG
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Known secondary structure (DSSP)
SS





SS


TT

S

TTS
SSS

GGG

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence FAGHVANAFEDDKGHIQLQMAYAKDNVFFWWPDANGKGPRPGEVEAHFANFVLDYQSDKLPLAEPTYLVD
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Known secondary structure (DSSP)
TTS
SS
S
TTS

TTS



TT



TT



B



S
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence DDMEFPRIDDRVATRKHKHTFFCIFDRKPGVTDFEFVMPRAGGGAPMSNGLAHLNHETGDIQRYLPGPRK
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Known secondary structure (DSSP) S


GGGTTS





STTSS

SSS



TTT




TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LTGECIFIPRNSEAAEGDGYVMVLLANYEDMCSELAVLDTKDLTNEVALIKLPVRLRPGLHGNWVDKSDV
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Known secondary structure (DSSP)


SSTT

TT
TTTTGGGTTS
SS






TT
T
 .......
Sequence DGHPAPL
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SS confidence






Known secondary structure (DSSP) TSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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