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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5u6fA_

Fold library idPDB HeaderMoleculeTitle
c5u6fA_1.50PDB header: cell adhesionChain: A: PDB Molecule: lpxtg-motif cell wall anchor domain protein;


Added to library: Sat Jun 16 08:20:22 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KKPGVGTYATVDKLKAFDVTDGKKDAFTIKDTVRLYNVEEGKTYAIAGQLYEQSVAGDEGSALAKAATTV
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Known secondary structure (DSSP)


BTTBSTT
TT
SS

TT
GGGTT
TT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence KVTASMAKPATEVEKTKYGEDVKVYETEMDLTVKREDLTKNQVVKDDIALVVYEQLWAEGTYEKVNDTEV
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Known secondary structure (DSSP)

GGGB




TT

TTS


S

TTS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TPKGKSEPVAKHNDPQSSSQSITAEPQFGSLKLTKTVTGWEDAFAKVARPEASYKFTVKCVQKGSVDEFT
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Known secondary structure (DSSP) STT


S

TT
STT

S

TTT
SS
GGG

TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LKEGEEKTVEGIPLGDTCTISEDVQGAVNQAGLKDTVKFTAVNGVTVDSQVNGEAVVKIGGSDTVANVEV
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Known secondary structure (DSSP)
TT
TT

TSSTT


SSTTS





S
 ........
Sequence TAENSFSY
Predicted secondary structure





SS confidence







Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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