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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5u4oA_

Fold library idPDB HeaderMoleculeTitle
c5u4oA_2.05PDB header: structural genomics, unknown functionChain: A: PDB Molecule: abc transporter substrate-binding protein;


Added to library: Tue Mar 14 10:50:38 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EGGVLTIARLSDADNLDPHFITNIPSASVVYHKVYENLVQRDKNXDFKPXLAKEWKQIDDLNWEFKLQQG
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Known secondary structure (DSSP)


SS

S


TTT

SBTTTB

S
TTS
SSTTT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VTFQDGAPFNAEAVKKNFERVLDPKTVYSXIQEIKVIDEYTVQFILKYPYSPLLSIFASNEGSILSPKAI
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Known secondary structure (DSSP)
B
TTS
B
STT




TTTTTTSS

TTSGGG



 .........150.........160.........170.........180.........190.........200.........210
Sequence DEKGKGLAQHPVGTGPYTFKSWKPGEEIRLEKNKNYWGEKAKVDEVVFKVVPEDATRIGXIETSEAHIAE
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Known secondary structure (DSSP) SS
S
TTTS


SSSTTT
TT
SSS

SSS


TTS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence NLPVTEVERVKNSPSXELIENEGLGVEYIGFNVEKKPFDNPLVRQAIAHAIETKGILKGVYNNVGTEINS
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Known secondary structure (DSSP) S

GGGT
TT

S

TTSTTTTS

STTTT
SB

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VXTPKVFGYTKDVKGYKYDINTAKKLLADAGYPNGFKTTIWTNDSKVRXALVEVIQSQLKGIGVDVEIKV
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Known secondary structure (DSSP) SS
TTSBT

S







TT
TT


TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence XEYGAFLAATNKSEHAXFVGGWGNATGDGDYNQYNLFHSSSHGATGNQFFYSNPEVDKLIEEARKEKDET
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Known secondary structure (DSSP)
TT

S

TTSBSGGGBTTTSBTT






 .........430.........440.........450.........460.........470....
Sequence KRKELYKQLQEIELKDALLVPIRGINHIAATTKNIKGFWIDPSGYLRLEGVELQ
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Known secondary structure (DSSP) TT


TTS

TTS

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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