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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5u4nA_

Fold library idPDB HeaderMoleculeTitle
c5u4nA_1.60PDB header: lyaseChain: A: PDB Molecule: fructose-1;


Added to library: Fri Feb 10 05:08:26 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVNAPVIVQASAGARKYAGAPFLRHLILAAV
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Known secondary structure (DSSP)




TT



ST



 .........80.........90.........100.........110.........120.........130.........140
Sequence EEFPHIPVVMHQDHGASPDVCQRSIQLGFSSVMMDGSLLEDGKTPSSYEYNVNATRTVVNFSHACGVSVE
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Known secondary structure (DSSP)
TTS

STT
S
TTB
TTSSSB

TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GEIGVLGNLETGEAGEEDGVGAAGKLSHDQMLTSVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGD
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Known secondary structure (DSSP) S



TTT




BTTBS

S


B



S
BS

SSS
SBSSS

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VLRIDRIKEIHQALPNTHIVMHGSSSVPQEWLKVINEYGGNIGETYGVPVEEIVEGIKHGVRKVNIDTDL
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Known secondary structure (DSSP) TS

TT


S




TT



S
B


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence RLASTGAVRRYLAENPSDFDPRKYLGKTIEAMKQICLDRYLAFGCEGQAGKIKPVSLEKMASRYAKGELN
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Known secondary structure (DSSP)
TT


TT
TTGGGG




TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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