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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5u1cD_

Fold library idPDB HeaderMoleculeTitle
c5u1cD_3.90PDB header: viral proteinChain: D: PDB Molecule: hiv-1 integrase, sso7d chimera;


Added to library: Thu Feb 9 16:34:52 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence CSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTT
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Known secondary structure (DSSP)

SS
GGG

TTTT
SSSSS







 .........80.........90.........100.........110.........120.........130.........140
Sequence VKAACWWAGIQSMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKAGERIVDIINFRVYYRDSRDPVWKG
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Known secondary structure (DSSP)

GGG
SS





BTTB




 .........150.........160.........170..
Sequence PAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIR
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Known secondary structure (DSSP)

SS
SS
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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