Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5tshF_

Fold library idPDB HeaderMoleculeTitle
c5tshF_2.30PDB header: atp-binding proteinChain: F: PDB Molecule: type iv pilus biogenesis atpase pilb;


Added to library: Sat May 20 08:24:31 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DAPVVKLVNLILTDAIKRKASDIHIEPYERSFRVRYRIDGVLYEVMKPPLKLKNAITSRIKIMAELDIAE
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)
TT
S
SS
TT


GGGTT

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RRLPQDGRIKIKMDYRVSVLPTLFGEKVVLRLLDKSNLQLDMTKLGYEPDALHYFKEAIHKPFGMVLVTG
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)
SS



TT
TTT



GGGS


TSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PTGSGKTVSLYSALGELNKTTENISTAEDPVEFNFAGINQVQMHEDIGLNFAAALRSFLRQDPDIIMIGE
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)
TTSS

TTS
SS

S

TT
BGGGTB
TTS

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IRDFETAEIAIKAALTGHLVLSTLHTNDAPATINRLLNMGVEPFLVASAVNLITAQRLARRVCSECKQPE
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)

STT


SST


SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence EIPIQALIDAGVSPDEGPSYVCYKGTGCVKCNNTGYKGRVGFYQVMPMLEEIRELILNGANTAEIKRESM
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)


T

TTTGGG




GGGTTTT

TT

 .........360.........370.........380..
Sequence RLGIKTMRQSGLTKLKEGVTSFEEVLRVTVAD
Predicted secondary structure












SS confidence































Known secondary structure (DSSP) TT


TTSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D