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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5troA_

Fold library idPDB HeaderMoleculeTitle
c5troA_1.80PDB header: hydrolaseChain: A: PDB Molecule: penicillin-binding protein 1;


Added to library: Thu Feb 9 21:35:26 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QQPERGKIYDRNGKVLAEDVERYKLVAVIDKKASANSKKPRHVVDKKETAKKLSTVINXKPEEIEKRLSQ
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Known secondary structure (DSSP)


B



TTS


GGGGTT
SS
SS
S
SS

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence KKAFQIEFGRKGTNLTYQDKLKIEKXNLPGISLLPETERFYPNGNFASHLIGRAQKNPDTGELKGALGVE
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Known secondary structure (DSSP) TT
S

GGGGSSB
TT
TT
TTSSSS

TTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence KIFDSYLSGKRGDDVHLTIDSNIQVFVEEALDGXVERYQPKDLFAVVXDAKTGEILAYSQRPTFNPETGK
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Known secondary structure (DSSP) T


B

S


TTT
BS


TTT
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence DFGKKWANDLYQNTYEPGSTFKSYGLAAAIQEGAFDPDKKYKSGHRDIXGSRISDWNRVGWGEIPXSLGF
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Known secondary structure (DSSP) TTTS



TTTT

B

GGGGTT


TT

STT
TTSS

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence TYSSNTLXXHLQDLVGADKXKSWYERFGFGKSTKGXFDGEAPGQIGWSNELQQKTSSFGQSTTVTPVQXL
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Known secondary structure (DSSP) TT

TTTTS



SSTT



B


SSTTTSSSBB
 .........360.........370.........380.........390.........400.........410.........420
Sequence QAQSAFFNDGNXLKPWFVNSVENPVSKRQFYKGQKQIAGKPITKDTAEKVEKQLDLVVNSKKSHAANYRI
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Known secondary structure (DSSP) GGGGTTT


B

TTT







S
STT
S
GGG
B
 .........430.........440.........450.........460.........470.........480.........490
Sequence DGYEVEGKTGTAQVAAPNGGGYVKGPNPYFVSFXGDAPKKNPKVIVYAGXSLAQKNDQEAYELGVSKAFK
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Known secondary structure (DSSP) TTB


B
TTSSSB

SSS
SSSS
SSSSTT
 .........500.....
Sequence PIXENTLKYLNVGKS
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Known secondary structure (DSSP) TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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