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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5tprB_

Fold library idPDB HeaderMoleculeTitle
c5tprB_1.70PDB header: lyaseChain: B: PDB Molecule: 3-dehydroquinate synthase;


Added to library: Tue Feb 28 11:18:03 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IVQAKFEAKETSFHVEGYEKIEYDLVYVDGIFEIQNSALADVYQGFGRCLAIVDANVSRLYGNQIQAYFQ
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Known secondary structure (DSSP)




SS








SSTT
TT

TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YYGIELRLFPITITEPDKTIQTFERVIDVFADFKLVRKEPVLVVGGGLITDVVGFACSTYRRSSNYIRIP
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Known secondary structure (DSSP) TT



GGG
ST

TT

SGGG


 .........150.........160.........170.........180.........190.........200.........210
Sequence TTLIGLIDASVAIKVAVNHRKLKNRLGAYHASRKVFLDFSLLRTLPTDQVRNGMAELVKIAVVAHQEVFE
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Known secondary structure (DSSP)
STTTTS
TT


S
GGGGGSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence LLEKYGEELLRTHFGNIDATPEIKEIAHRLTYKAIHKMLELEVPNLHELDLDRVIAYGHTWSPTLELAPR
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Known secondary structure (DSSP) TTTTTSS

GGGTT

S


GGGTT
SSTSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LPMFHGHAVNVDMAFSATIAARRGYITIAERDRILGLMSRVGLSLDHPMLDIDILWRGTESITLTRDGLL
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Known secondary structure (DSSP) S


TTSS
TT

S

TT
STTT

 .........360.........370.........380.........390.........400
Sequence RAAMPKPIGDCVFVNDLTREELAAALADHKELCTSYPRGGEGVDVYPVYQ
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Known secondary structure (DSSP)
SSTT




TTSGGGG

SS
S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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