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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5tnvA_

Fold library idPDB HeaderMoleculeTitle
c5tnvA_1.04PDB header: isomeraseChain: A: PDB Molecule: ap endonuclease, family protein 2;


Added to library: Thu Feb 9 16:04:46 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MYSAHTWPIAANMLGFGNRAPDGGHIKDAPAGVWAKQLRQVRELGFDHIDPTDAWVPLAALSDSRIEEFR
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Known secondary structure (DSSP)


GGGS

GGG
SB
TTSSBGGGS
TT
S
TTTSS
GGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TVLADEGLAISSISMTRSSIVDVENGEKNLADAHRLIDLAPSFGATIVNTGFMQALTPEQEKQIWFWLVQ
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Known secondary structure (DSSP) TT



S

TT
TTTT







SSSGGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GHVDDPALRDLAIERVRELGDHARTNGIQLSLEMYEDTYIGTPDDAVAFIKDVDHDAVGLNPDLGNLVRL
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Known secondary structure (DSSP)




GGGTT


TTSTTSS

TT

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence HRPMPHPSEMYAKVLPYSNFWHIKNYSRDFDPATGAYSSAPLPLKYGYVNYRQIIRLALELGYTGPFCCE
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Known secondary structure (DSSP) SS



GGGBS


TTTT
GGGSSS
TT




 .........290.........300......
Sequence HYGSDSLGVCAENREYILQVLTSALA
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Known secondary structure (DSSP)

SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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