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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5tnuB_

Fold library idPDB HeaderMoleculeTitle
c5tnuB_3.05PDB header: transcriptionChain: B: PDB Molecule: dna-dependent atpase xpbii;


Added to library: Sat Nov 4 10:14:13 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSHMVYLRYFKGLILSDAYAPGLKWSDELKAYSALAFKYRDVRKYFLEKEIEVEENVIDSLPFPLIKDKI
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Known secondary structure (DSSP)

S
TTSS

TT
TTTTGGGTT















 .........80.........90.........100.........110.........120.........130.........140
Sequence ELRDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSIMKVATLIVVPTIDLITQWKERINKYLDFDPG
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Known secondary structure (DSSP)


S

TTS

S
S
TS


 .........150.........160.........170.........180.........190.........200.........210
Sequence IIGGGEDSLKGITVITYDSAYTRAEELGNKFPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATPERDD
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Known secondary structure (DSSP) TT


STTT
STGGGTTSTTGGG


SS



TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GKHELYPILVGPIVYRKSVEELAGKYIAKYKIKKLYVSLTNEEKLKDFLSSRGLKLQNLDDFHRLVKLAA
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Known secondary structure (DSSP)
GGGGT



TTTTTSS

SSS








S







S

SS
SSSS


SSS

S
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KDKEAREALLAWHESLNIAVNSQSKIEKLRENEKIIVFTRDTQMAYRISKTFLIPVVTYKTDKDEREEIL
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Known secondary structure (DSSP) SS


GGG










TT









SSS
S
TT




TTS
 .........360.........370.........380.........390.........400.........410.
Sequence QKFRDGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGRILRKKDKEALLIEI
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Known secondary structure (DSSP)
SSS


S






S
S



TT

SS


SGGGS



SS





B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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