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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5tjjA_

Fold library idPDB HeaderMoleculeTitle
c5tjjA_2.50PDB header: transcriptionChain: A: PDB Molecule: transcriptional regulator, iclr family;


Added to library: Thu Feb 9 20:29:16 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XDYQVPSVALAARVLKLLSRHKYRQSTLTEIAERLGVNKTTCLRVLRTLEREDFVSYDPQSRRYSLGPYL
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Known secondary structure (DSSP)
TT

TSGGGSST

TTSTTTT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IPLGARAADLNDVYAHALAELHQVAAHTGXTAVLVKRLRDDRVIYIGSAEPPGDGVRIAVSVGQQFPVYG
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Known secondary structure (DSSP) S
SS
SSS

SSSS





TT
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AAFGRCFLAYDDESTWRRVLREGLKAYTPNSITDEEEYVRLLQEVREKGYAVSHGELWPGISAVAVPVFN
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Known secondary structure (DSSP) TTS
T




STT



S
SSSSTTB
 .........220.........230.........240.........250....
Sequence QQNKVDLVLSCLTXTSVIQGEDVERAVKALKESAAKVSAWSGYQ
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Known secondary structure (DSSP) TTS
GGG

TB


Download:PDB structure FASTA sequence

Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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