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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5tj5A_

Fold library idPDB HeaderMoleculeTitle
c5tj5A_3.90PDB header: motor proteinChain: A: PDB Molecule: v-type proton atpase subunit a;


Added to library: Thu Feb 9 14:52:11 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)

S









S
 .........80.........90.........100.........110.........120.........130.........140
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) T

TTTT
















TT
SSS
SSTTS

TTT

SS




SSS

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQYREINAGLPTIVTFPFMFAIMFGHGFLM
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Known secondary structure (DSSP)

TTTT

T



SSS

STTTT


T
 .........290.........300.........310.........320.........330.........340.........350
Sequence TLAALSLVLNEKKINKMKRGEIFDMAFTGRYIILLMGVFSMYTGFLYNGTENALLFSNSYKMKLSILMGF
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Known secondary structure (DSSP) T

ST



S

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence IHMTYSYFFSLANHLDIIGNFIPGLLFMQGIFGYLSVCIVYKWAVDWVKDGKPAPGLLNMLINMFLSPGT
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Known secondary structure (DSSP) S




STTTTTTTTTS
SSSTT



STTT
TT

 .........430.........440.........450.........460.........470.........480.........490
Sequence IDDELYPHQAKVQVFLLLMALVCIPWLLLVKPLHFKFDIMIHQVIHTIEFCLNCVSHTASYLRLWALSLA
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Known secondary structure (DSSP) TTS


SS
T


TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence HAQLSSVLWTMTIQIAFGFRGFVGVFMTVALFAMWFALTCAVLVLMEGTSAMLHSLRLHWVESMSKPYEP
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Known secondary structure (DSSP) TTTS

ST

 .........570
Sequence FAFEYKDMEV
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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