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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5tibA_

Fold library idPDB HeaderMoleculeTitle
c5tibA_2.60PDB header: lipid binding proteinChain: A: PDB Molecule: sugar abc transporter substrate-binding protein,gasdermin-


Added to library: Thu Feb 9 11:32:07 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGY
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Known secondary structure (DSSP)


TT

TTS




TTTTT
S
SGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AQSGLLAEITPAAAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELK
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Known secondary structure (DSSP) TT
B





TTB
TTT
S

TTT
SS

SBSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AKGKSALMFNLQEPYFTWPLIAADGGYAFKYAAGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDY
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Known secondary structure (DSSP) TT



SSSTT
TTTTSTTSS
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence SIAEAAFNKGETAMTINGPWAWSNIDTSAVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFL
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Known secondary structure (DSSP) TT

GGGSS




TT


BTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence ENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINA
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Known secondary structure (DSSP) TTSSS

SSBTTSS


ST
 .........360.........370.........380.........390.........400.........410.........420
Sequence ASGRQTVDAALAAAQTNAAAMSAGLDIHFRGKTKSRNMKEKLEDMESVLKDLTEEKRKDVLNSLAKCLGK
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Known secondary structure (DSSP) TSS


SS







TS
TTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence EDIRQDLEQRVSEVLISRELHMEDSDKPLLSSLFNAAGVLVEARAKAILDFLDALLELSEEQQFVAEALE
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Known secondary structure (DSSP)
S

GGGTT
TB
TTS
B
T
ST
 .........500.........510.........520.........530...
Sequence KGTLPLLKDQVKSVMEQNWDPEARILCALYVVVSILLELAEGP
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Known secondary structure (DSSP) T
SSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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