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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5thxA_

Fold library idPDB HeaderMoleculeTitle
c5thxA_1.55PDB header: oxidoreductaseChain: A: PDB Molecule: ferredoxin--nadp reductase;


Added to library: Thu Feb 9 17:52:01 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AAFNTQKVLSVHHWTDAYFTFTCIRDESLRFENGQFVMVGLMADGKPLMRAYSVASANWEEHLEFFSIKV
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Known secondary structure (DSSP)


SSS

TT



TT
TT

S
TTSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence QDGPLTSRLQHLKVGDEVLISKKPTGTLVACDLNPGKHLYLLSTGTGIAPFLSITKDPEIYEQFEKIILV
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Known secondary structure (DSSP) TT
TTTT

TT
S

B
S

GGGB


SGGGGTT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence HGVRYKKDLAYYDRFTKELPEHEYLGDLVKEKLIYYPIVSREEFEHRGRLTDLMVSGKLFEDIGLPKINP
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Known secondary structure (DSSP) SSGGG
TTTTGGG
TTTTTTSSS

SSBS
TST




T
 .........220.........230.........240.........250.......
Sequence QDDRAMLCGSPAMLKDTCKVLDDFGLTVSPKTGVRGDYLIERAFVDQ
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Known secondary structure (DSSP) TT
TT

B
SSTTS
BSSS



Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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