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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5theA_

Fold library idPDB HeaderMoleculeTitle
c5theA_2.10PDB header: rna binding protein/rnaChain: A: PDB Molecule: uncharacterized protein;


Added to library: Sat Mar 17 08:35:52 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SIYKVENRHDYGTKGTKVDILTGSGRVPSRILDAPVVQFKESTFEYKDKSYGTKHEESKGNWNMKGHQFI
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Known secondary structure (DSSP)

S


B






STT





SS






TTSSGGGGTTB


TT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence STPAKQVNLRAIFINNANTAPPASMESELDISMDKFASDVKQLGVDFNVSGKPILINQFGPPIKPTFETS
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Known secondary structure (DSSP) B

SS

SSS


TTTTT



S

S

S
B



B

 .........150.........160.........170.........180.........190.........200.........210
Sequence PGEISLLNLLENIPSNTYILYVLRRGNDSAVYDRLKYITDLKFGALNSCVVWDNFKKNSIQYNSNVVMKM
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Known secondary structure (DSSP) T

SSSSSS
TTTT


TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence NLKLLGSNHSLSIENNKLLIDKESNLPILVLGSDVTHYPEKDQNSIASLVGSYDDKFTQFPGDYMLQDGP
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Known secondary structure (DSSP) TT
B


GGGTTTT


SSTT


SSS




 .........290.........300.........310.........320.........330.........340.........350
Sequence GEEIITNVGSLMLNRLKIYQKHNNGKLPTKIMYFRDGVSVDQFSQVVKIEVKSIKESVRKFGPQLNGGNK
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Known secondary structure (DSSP) T

S
TTGGGGTTTT


S
S

GGGTTS

 .........360.........370.........380.........390.........400.........410.........420
Sequence YDPPVTCIATVKRNQVRFIPIQENAKNEKGEEVAVQSMGNVMPGTVVDRGITSVAHFDFFIQSHQALKGT
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Known secondary structure (DSSP)






S




S
TTS

TT
TT
SSSS
SSB

S

SSSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence GVPCHYWCLYDENQSTSDYLQEICNNLCYIFGRSTTSVKVPAPVYYADLLCTRATCFFKAGFELNMAQAT
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Known secondary structure (DSSP)


SS


TT

TT
SB

SS
T

 .........500.........510.
Sequence VSKNVLLPQVNDNIKSVMYYI
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Known secondary structure (DSSP)

S



GGGTTS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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