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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5t4oA_

Fold library idPDB HeaderMoleculeTitle
c5t4oA_6.90PDB header: hydrolaseChain: A: PDB Molecule: atp synthase subunit alpha;


Added to library: Thu Feb 9 13:25:02 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLADAMQGEMISLPGNRYAIALNLERDS
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Known secondary structure (DSSP)

TTTGGG



TT
TT
TT

TT




SSS






SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VGAVVMGPYADLAEGMKVKATGRILEVPVGRGLLGRVVNTLGAPIDGKGPLDHDGFSAVEAIAPGVIERQ
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Known secondary structure (DSSP)

S
GGG

S






S

S

STTTT



SS
GGGSSSS



S
S





TTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence SVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQRDSGIKAIYVAIGQKASTISNVVR
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Known secondary structure (DSSP)







SSTTS


TT
B



TTTTTTTTTTTTT

S



S

 .........220.........230.........240.........250.........260.........270.........280
Sequence KLEEHGALANTIVVVATASESAALQYLAPYAGAAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRP
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Known secondary structure (DSSP)

GGG






TTS
TTTTTTT

B




TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence PGREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITD
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Known secondary structure (DSSP)

BTTB
TTT


STTSS
S



BB



TT
S


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence GQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRELAAFSQFASDLDDATRNQ
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Known secondary structure (DSSP) B


B
TT
S

B
TTTS
BSS
STTS
TGGGTT

S

 .........430.........440.........450.........460.........470.........480.........490
Sequence LDHGQKVTELLKQKQYAPMSVAQQSLVLFAAERGYLADVELSKIGSFEAALLAYVDRDHAPLMQEINQTG
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Known secondary structure (DSSP)


TT



TT
GGGGG


STS
 .........500.........510.
Sequence GYNDEIEGKLKGILDSFKATQ
Predicted secondary structure




SS confidence




















Known secondary structure (DSSP)


T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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