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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5t4mB_

Fold library idPDB HeaderMoleculeTitle
c5t4mB_2.24PDB header: cell adhesionChain: B: PDB Molecule: protocadherin-15;


Added to library: Tue Feb 28 11:47:15 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ASPMFLPCVLVPNTRDCRPLTYQAAIPELRTPEELNPIIVTPPIQAIDQPGILYSILVGTPEDYPRFFHM
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Known secondary structure (DSSP)


S


B
TTSS
B


TT


SB

BS






STTGGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence HPRTAELSLLEPVNRDFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPV
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Known secondary structure (DSSP)
TTT


S


TTT
SSSSS






S

SSSTT

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GATISDSLNLTSPLRIVALDKDIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFS
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Known secondary structure (DSSP) T
B
BSSTT

SB


TTS
TTS



SS
TTT
SSSS
SS


TTT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence ITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYVYTDMRPGDSVIQLTAVDADEGSNGEITYEILV
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Known secondary structure (DSSP)
SS
B









B
S
STT

TT



B

SSGGGT
 .........290.........300.........310.........320.........330.........340......
Sequence GAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAPPAERRNSICTVYIEVLPPNNQSPPRF
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Known secondary structure (DSSP)
STTS
TTT

TT



TT

S
TTT





S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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