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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5sznA_

Fold library idPDB HeaderMoleculeTitle
c5sznA_2.94PDB header: cell adhesionChain: A: PDB Molecule: protocadherin gamma a9;


Added to library: Thu Feb 9 16:59:16 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IRYSVPEETEKGYIVGNISKDLGLEPERGVRIISKGKTQLFSLSPRSGSLVTAGRIDREELCAQSATCLL
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SS

TT
ST










SS


TTTS
S


GGGTTTT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NFKVLVEDRVKLYGVEVEVVDINDNAPKFEAENLFVKISEIAAPGARYPLPEAVDPDVGINSLQSYQLSP
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Known secondary structure (DSSP)
TTSSS






B
S
S
SS

TT




B
SS
GGGS

 .........150.........160.........170.........180.........190.........200.........210
Sequence NRHFSLHLQTGDDGTINPELVLERTLDREEEPTHHLVLTAYDGGNPRRSSTALIQVTVLDTNDNAPVFDQ
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Known secondary structure (DSSP)
SS

TTS


S


TTT
SSSSS




S



SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PVYRVKVLENVAPGTLLLTVRASDPDEGANGKVTYKFRKINEKHSLLFHLHENTGEMTVAKNLDYEECSL
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Known secondary structure (DSSP) STT

TT




S
GGGG

S

SST
TTT

S


TTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence YEMEIQAEDGGGLKGRTKVVVMVEDVNDNRPEVTITSLFSPVREDAPPGTVILLFNAHDQDSGKNGQVVC
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Known secondary structure (DSSP)
SSS


S




SS

TT

TT

SS
GGGT
 .........360.........370.........380.........390.........400.........410.........420
Sequence SIQENPSFKLENSVDDYYRLLTAQILDREKASEYNITVTATDRGTPSMSTEVHITLYVADINDNPPAFSQ
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Known secondary structure (DSSP)


SSTT
S


TTT
SSSSS










SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence TSYSVYLPENNPRGTSIFSVSAHDPDDEENAKVTYSLVENTIQGAPLSSYVSINSDTGVLYALQSFDYEQ
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Known secondary structure (DSSP) SSS


TT


SS
GGGG





TT
T
TTT

S


TTT
 .........500.........510.........520...
Sequence FQNLQMQVKASDNGHPPLSSNVSLSVFLLDQND
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Known secondary structure (DSSP)
SSSSS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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