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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5szlC_

Fold library idPDB HeaderMoleculeTitle
c5szlC_4.20PDB header: cell adhesionChain: C: PDB Molecule: protocadherin gamma a1 extracellular cadherin domains 1-4,


Added to library: Thu Feb 9 18:37:04 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NIRYSVPEETDKGSFVGSIAKDLGLETRELMERGIRIVSRGRSQLFSLNPRSGSLVTAGRIDREELCAQS
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Known secondary structure (DSSP)
SS

TT
T

T


TTGGGTTTT
S


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TPCVVSFNILMEDEMKLLPIEVEIIDINDNTPQFQLEELELKMSEITTPGTRIPLPLGQDLDVGINSLQS
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Known secondary structure (DSSP) S

TTTT






S
STT

TT




S

GGGS

 .........150.........160.........170.........180.........190.........200.........210
Sequence YQLSANPHFSLDVQQGPEGPQQPEMVLQRPLDREKDAVHYLVLTASDGGSPIHSGTLQIHVQVVDVNDNP
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Known secondary structure (DSSP)


SS
SSS
S


TTT
S
SSSS







 .........220.........230.........240.........250.........260.........270.........280
Sequence PAFTKAEYHVSVPENVPLGTRLLKVNATDPDEGANGRVTYSFHKVDHSVVRKFQLDAYTGELSNKEPLDF
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Known secondary structure (DSSP)
S
STT

TT




SSGGGG


SS
TT
TTT
SS


T
 .........290.........300.........310.........320.........330.........340.........350
Sequence EEYKVYPMEIQAQDGAGLMARAKVLVTVLDVNDNAPEVGITSVTNTVPENFPPGTTIALISVHDQDADNN
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Known secondary structure (DSSP) TT
S
SSS


S





TT

TT




GGG
 .........360.........370.........380.........390.........400.........410........
Sequence GHITCSIPGNLPFKLEKLVDNYYRLVTERTLDREQSSRHNITITATDQGTPPLSTQAHISLLVTDIND
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Known secondary structure (DSSP) S


SSSS

STT

S


TTT
S
SSS

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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