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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5sumA_

Fold library idPDB HeaderMoleculeTitle
c5sumA_2.80PDB header: ribosomal proteinChain: A: PDB Molecule: ribosome biogenesis protein nsa1;


Added to library: Sat Apr 29 08:27:31 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AMGSMRLLVSCVDSGSIKEVLCNIGTDTSVQSALQPFHVAPHLAEGLKAYVDRMWVISEDEAILARNSGV
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Known secondary structure (DSSP)



GGGT
TTTTSTTSB

S



GGG
TTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VELVKISKHLKENEALQVDDDLPKFDISEFEITSSVSDLFDDAKLESLVDGFVTLCPIKNNTFVAATKSG
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TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LLHIIKKGEDKKLIKLASLGLKAPVEFLQLYDLEKYIFAYGGEENLIKLVEIDSSFQSLKQIWEAKNVKN
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Known secondary structure (DSSP)
TTS


S

S




TT
TTSS






 .........220.........230.........240.........250.........260.........270.........280
Sequence DRLDMRVPVWPMALRFLEPSPGKTEKGKLNYQFAAITRWSHLTKYSTQHGRKPFAQIDLLPNREPLSQME
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Known secondary structure (DSSP)
TTS









S


TTS


TTSTTT
SS
S
SGGG

 .........290.........300.........310.........320.........330.........340.........350
Sequence VFDAKGENVVSSLGNFQSETFNELNVITTDYKKNVFKFDGNGRMLGKVGRDDITGSSTYIHVHDGKYLLQ
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Known secondary structure (DSSP)
TT



B
TT

B

S
GGG
SSS
TTS
SSTTT

S


TTT
 .........360.........370.........380.........390.
Sequence GGLDRYVRIFDIKTNKMLVKVYVGSRINFIVMLDDVEIEMP
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Known secondary structure (DSSP)
TT
TTT


SS








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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