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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5sujB_

Fold library idPDB HeaderMoleculeTitle
c5sujB_2.36PDB header: unknown functionChain: B: PDB Molecule: uncharacterized protein;


Added to library: Thu Feb 9 21:23:43 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LESPGFXVHKKLKSXSQSYGVXXTGVPAEVLGQXQAERSIPSINKTGNLKQQIAKEVSKVCHXXTEPTQS
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Known secondary structure (DSSP)


GGGGG


GGGS
SSS
TSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence CGQASNDVCELLLGKIEAEKFHFTKYEALSADGDNLKNVLENTAPSSTNLLIRFEIDREDPPIVLVKTKN
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Known secondary structure (DSSP)
S



TTSTS
TTT







S
 .........150.........160.........170.........180.........190.........200.........210
Sequence ENFNPETAVKNKIYLLENKLYFIDKXGNLFNLGPGKKKCTQLFNAIGDSAEYSLCDPFEPEKPEDFAISE
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Known secondary structure (DSSP) TT

TTTS
SS
SS

TT


S

S
S
SSSS




S
 .........220.........230.........240.........250.........260.........270.........280
Sequence IVDIFNEQKERFDFWIGSHSFTIYIPQTLGESPRQFYPYQAYFGSHTLQDWFVSDKDEYLSRIGIDKYIE
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Known secondary structure (DSSP) TGGG






TT






BTTTB
TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KLAVLGKTTNTKERSDIYAEFFSKRGREAFFCAHLNEKRQPLRVKFKITEINPELALKNLQETQEFIDTH
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Known secondary structure (DSSP)


S
TT
TTTTTSGGG


S


TS
 .........360.........370.........380
Sequence PGENPSDKVENYRNRAKLAXTEHLESLLDI
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Known secondary structure (DSSP)

SSTT


Download:PDB structure FASTA sequence

Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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