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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ov3B_

Fold library idPDB HeaderMoleculeTitle
c5ov3B_2.45PDB header: structural proteinChain: B: PDB Molecule: retinoblastoma-binding protein 5;


Added to library: Sat Mar 31 08:43:30 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLCWSRDGHKLVSAST
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Known secondary structure (DSSP)

S



TTSSTTSTTTT

SS

TTSST
 .........80.........90.........100.........110.........120.........130.........140
Sequence DNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNKVLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVV
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Known secondary structure (DSSP) TSTTTT
SS

SS
TTSSS

TTTTB

B


STT

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ASFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYD
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Known secondary structure (DSSP)
SSSS
TT
TTT


B
TTS
B


SSSSTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGE
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Known secondary structure (DSSP)
TTB



S

TTT



TTSSSSSSTTTT
STT
 .........290.........300.........310.......
Sequence LLLDVAWHPVRPIIASISSGVVSIWAQNQVENWSAFA
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Known secondary structure (DSSP)

SSSSTT




S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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