PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5ojsT_

Fold library id	PDB Header	Molecule	Title
c5ojsT_	3.70	PDB header: transcription	Chain: T: PDB Molecule: transcription-associated protein 1;

Links to external resources
Added to library: Sat Aug 12 09:03:47 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M S L T E Q I E Q F A S R F R D D D A T L Q S R Y S T L S E L Y D I M E L L N S P E D Y H F F L Q A V I P L L L N Q L K E V P I S Y D A H S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T G G G G S S S
S S G G G G G G T T
T T T S S
S S
T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P E Q K L R N S M L D I F N R C L M N Q T F Q P Y A M E V L E F L L S V L P K E N E E N G I L C M K V L T T L F K S F K S I L Q D K L D S F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
T T T T T T S S S
S S S
S
T
S
T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I R I I I Q I Y K N T P N L I N Q T F L R S S M F S F K I L S E C P I T M V T L Y S S Y K Q L T S T S L P E F T P L I M N L L N N R P A Y C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T S
S
S T T T S
S
S T T S
S S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence D F I L A Q I K A T S F L A Y V F I R G Y A P E F L Q D Y V N F V P D L I I R L L Q D C P S E L S S A R K E L L H A T R H I L S T N Y K K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T S S
S
S S S S
T T
S S T T S T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence F L P K L D Y L F D E R I L I G N G F T M H E T L R P L A Y S T V A D F I H N I R S E L Q L S E I E K T I K I Y T G Y L L D E S L A L T V Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T
S G G G G
T T T T T S S
S S
T T S
S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence I M S A K L L L N L V E R I L K L G K E N P Q E A P R A K K L L M I I I D S Y M N R F K T L N R Q Y D T I M K Y Y G R Y E T H K K E K A E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S G G G
T T T S S G

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence L K N S I Q D N D K E S E E F M R K V L V E M F D I K N Y A P I L L L P T P T N D P I K D A F Y L Y R T L M S F L K T I I H D L K V F N P P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
S
S
S S T T G G G S S
S
S
G G G G

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence P N E Y T V A N P K L W A S V S R V F S Y E E V I V F K D L F H E C I I G L K F F T K D A R E L M D Y L A F M F M Q M D N A T F N E I I E Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
G G G S S S S
G G G G G
T T T S
T T T T

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence E L P F V Y E R M L E D S G L L H V A Q S F L T S E I T S P N F A G I L L R F L K G K L K D L G N V D F N T S N V L I R L F K L S F M S V N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T S S
S
T T S S T T S S
T T T T

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence L F P N I N E V V L L P H L N D L I L N S L K Y S T T A E E P L V Y F Y L I R T L F R S I G G G R F E N L Y R S I K P I L Q V L L Q S L N Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S
G G G T S S S S T
S S T T T
S S
S G G G S T T S S T T T T

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence M I L T A R L P H E R E L Y V E L C I T V P Y L P F L M K P L V F A L Q Q Y P D L V S Q G L R T L E L C I A E Y F D P I I E P V I D D V S K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S S S S S S
S S T
S S S T T
T T T T T S G G G

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence A L F N L L Q P Q P F N H A I S H N V V R I L G K L G G R N R Q F L K P P T D L T E K T E L D I D A I A D F K I N G M P E D V P L S V T P G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S S
S S S S S T T
S
S
T T T
B
B T T
S S
B
S
S T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence I Q S A L N I L Q S Y K S D I H Y R K S A Y K Y L T C V L L L M T K S S A E F P T N Y T E L L K T A V N S I K L E R I G I E K N F D L E P T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S S S
T G G G S
S S
T T T T T T
S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence V N K R D Y S N Q E N L F L R L L E S V F Y A T S I K E L K D D A M D L L N N L L D H F C L L Q V N T T L L N K R N Y N G T F N I D L K N P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T T T T T T T T T S S S S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence N F M L D S S L I L D A I P F A L S Y Y I P E V R E V G V L A Y K R I Y E K S C L I Y G E E L A L S H S F I P E L A K Q F I H L C Y D E T Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
G G G T S T T T T
S S S T S
S S S S G G G
S S T

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence Y N K R G G V L G I K V L I D N V K S S S V F L K K Y Q Y N L A N G L L F V L K D T Q S E A P S A I T D S A E K L L I D L L S I T F A D V K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S S S
S S S
T T S
T T S T T S S T T S S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence E E D L G N K V L E N T L T D I V C E L S N A N P K V R N A C Q K S L H T I S N L T G I P I V K L M D H S K Q F L L S P I F A K P L R A L P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S T T S
S S S T T S S T T
T T T T T T T T S S T T T S
S S
S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence F T M Q I G N V D A I T F C L S L P N T F L T F N E E L F R L L Q E S I V L A D A E D E S L S T N I Q K T T E Y S T S E Q L V Q L R I A C I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S S
S S T T S
T T S
S S S
T T T
S S

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence K L L A I A L K N E E F A T A Q Q G N I R I R I L A V F F K T M L K T S P E I I N T T Y E A L K G S L A E N S K L P K E L L Q N G L K P L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T T T T T T T S T T G G G
S
T T S
S
T T T T T

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 . . . . . . . . . 1390 . . . . . . . . . 1400

Sequence M N L S D H Q K L T V P G L D A L S K L L E L L I A Y F K V E I G R K L L D H L T A W C R V E V L D T L F G Q D L A E Q M P T K I I V S I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S
S T T S
S S
T S S T T T T S
S T T S

. . . . . . . . . 1410 . . . . . . . . . 1420 . . . . . . . . . 1430 . . . . . . . . . 1440 . . . . . . . . . 1450 . . . . . . . . . 1460 . . . . . . . . . 1470

Sequence N I F H L L P P Q A D M F L N D L L L K V M L L E R K L R L Q L D S P F R T P L A R Y L N R F H N P V T E Y F K K N M T L R Q L V L F M C N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S S S
S
S S S T T
S S
S S S T S
S
S

. . . . . . . . . 1480 . . . . . . . . . 1490 . . . . . . . . . 1500 . . . . . . . . . 1510 . . . . . . . . . 1520 . . . . . . . . . 1530 . . . . . . . . . 1540

Sequence I V Q R P E A K E L A E D F E K E L D N F Y D F Y I S N I P K N Q V R V V S F F T N M V D L F N T M V I T N G D E W L K K K G N M I L K L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T
T T T T T G G G
T S T T T S S
S T
S S
S S T T T
S T T

. . . . . . . . . 1550 . . . . . . . . . 1560 . . . . . . . . . 1570 . . . . . . . . . 1580 . . . . . . . . . 1590 . . . . . . . . . 1600 . . . . . . . . . 1610

Sequence D M L N L T L K T I K E N S F Y I D H L Q L N Q S I A K F Q A L Y L R F T E L S E R D Q N P L L L D F I D F S F S N G I K A S Y S L K K F I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S
T T S S
S S T T S S S T T T
T T S S

. . . . . . . . . 1620 . . . . . . . . . 1630 . . . . . . . . . 1640 . . . . . . . . . 1650 . . . . . . . . . 1660 . . . . . . . . . 1670 . . . . . . . . . 1680

Sequence F H N I I A S S N K E K Q N N F I N D A T L F V L S D K C L D A R I F V L K N V I N S T L I Y E V A T S G S L K S Y L V E D K K P K W L E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S T T T T
T T S
T T S
T S S S S
S
S T T
S

. . . . . . . . . 1690 . . . . . . . . . 1700 . . . . . . . . . 1710 . . . . . . . . . 1720 . . . . . . . . . 1730 . . . . . . . . . 1740 . . . . . . . . . 1750

Sequence L H N K I W K N S N A I L A Y D V L D H H D L F R F E L L Q L S A I F I K A D P E I I A E I K K D I I K F C W N F I K L E D T L I K Q S A Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
S S S S
S S
S
S S S
T G G G G
S S S T T

. . . . . . . . . 1760 . . . . . . . . . 1770 . . . . . . . . . 1780 . . . . . . . . . 1790 . . . . . . . . . 1800 . . . . . . . . . 1810 . . . . . . . . . 1820

Sequence L V T S Y F I S K F D F P I K V V T Q V F V A L L R S S H V E A R Y L V K Q S L D V L T P V L H E R M N A A G T P D T W I N W V K R V M V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
S T T T T S S
T T S T T T T S

. . . . . . . . . 1830 . . . . . . . . . 1840 . . . . . . . . . 1850 . . . . . . . . . 1860 . . . . . . . . . 1870 . . . . . . . . . 1880 . . . . . . . . . 1890

Sequence N S S S Q N N I L Y Q F L I S H P D L F F N S R D L F I S N I I H H M N K I T F S D S H T L A I D L A S L I L Y W E N K T L S L H L R E A C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S G G G T S S
T T
S T T
S

. . . . . . . . . 1900 . . . . . . . . . 1910 . . . . . . . . . 1920 . . . . . . . . . 1930 . . . . . . . . . 1940 . . . . . . . . . 1950 . . . . . . . . . 1960

Sequence T A F L I R Y V C A S E L G L R A I N I L S E L I S D V K L V Y F E K F S E N I L Y Y C M N A L D V L Y V F F K N K T K E W I M E N L P T I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S G G G G
T T T T T T
T T T

. . . . . . . . . 1970 . . . . . . . . . 1980 . . . . . . . . . 1990 . . . . . . . . . 2000 . . . . . . . . . 2010 . . . . . . . . . 2020 . . . . . . . . . 2030

Sequence Q N L L E K C I K S D H H D V Q E A L Q K V L Q V I M K A I K A Q G V S V I I E E E S P G K T F I Q M L T S V I T Q D L Q E T S S V T A G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T G G G T S
T
S
S S S S
T T T T
S S G G G S

. . . . . . . . . 2040 . . . . . . . . . 2050 . . . . . . . . . 2060 . . . . . . . . . 2070 . . . . . . . . . 2080 . . . . . . . . . 2090 . . . . . . . . . 2100

Sequence T L A W V L F M N F P D N I V P L L T P L M K T F S K L C K D H L S I S Q P K D A M A L E E A R I T T K L L E K V L Y I L S L K V S L L G D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S T T T
T T S S
S S
S
S S
S

. . . . . . . . . 2110 . . . . . . . . . 2120 . . . . . . . . . 2130 . . . . . . . . . 2140 . . . . . . . . . 2150 . . . . . . . . . 2160 . . . . . . . . . 2170

Sequence S R R P F L S T V A L L I D H S M D Q N F L R K I V N M S R S W I F N T E I F P T V K E K A A I L T K M L A F E I R G E P S L S K L F Y E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S T
S
S
G G G G T
T T

. . . . . . . . . 2180 . . . . . . . . . 2190 . . . . . . . . . 2200 . . . . . . . . . 2210 . . . . . . . . . 2220 . . . . . . . . . 2230 . . . . . . . . . 2240

Sequence V L K L F D Q E H F N N T E I T V R M E Q P F L V G T R V E D I G I R K R F M T I L D N S L E R D I K E R L Y Y V I R D Q N W E F I A D Y P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
T T S
T T T T T T T T T T T T S S
T S S
S S S
T T S S

. . . . . . . . . 2250 . . . . . . . . . 2260 . . . . . . . . . 2270 . . . . . . . . . 2280 . . . . . . . . . 2290 . . . . . . . . . 2300 . . . . . . . . . 2310

Sequence W L N Q A L Q L L Y G S F N R E K E L S L K N I Y C L S P P S I L Q E Y L P E N A E M V T E V N D L E L S N F V K G H I A S M Q G L C R I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T B
S
S S
S
S S G G G S
S S
S
S S

. . . . . . . . . 2320 . . . . . . . . . 2330 . . . . . . . . . 2340 . . . . . . . . . 2350 . . . . . . . . . 2360 . . . . . . . . . 2370 . . . . . . . . . 2380

Sequence S S D F I D S L I E I F Y Q D P K A I H R A W V T L F P Q V Y K S I P K N E K Y G F V R S I I T L L S K P Y H T R Q I S S R T N V I N M L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T
T T G G G
T T S T
S S
S S S S S S T

. . . . . . . . . 2390 . . . . . . . . . 2400 . . . . . . . . . 2410 . . . . . . . . . 2420 . . . . . . . . . 2430 . . . . . . . . . 2440 . . . . . . . . . 2450

Sequence D S I S K I E S L E L P P H L V K Y L A I S Y N A W Y Q S I N I L E S I Q S N T S I D N T K I I E A N E D A L L E L Y V N L Q E E D M F Y G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S S
S
S S T T S S S
S T T T T G G G T
S S
T
S

. . . . . . . . . 2460 . . . . . . . . . 2470 . . . . . . . . . 2480 . . . . . . . . . 2490 . . . . . . . . . 2500 . . . . . . . . . 2510 . . . . . . . . . 2520

Sequence L W R R R A K Y T E T N I G L S Y E Q I G L W D K A Q Q L Y E V A Q V K A R S G A L P Y S Q S E Y A L W E D N W I Q C A E K L Q H W D V L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S T T T
S S S S S
G G G T S
T T G G G

. . . . . . . . . 2530 . . . . . . . . . 2540 . . . . . . . . . 2550 . . . . . . . . . 2560 . . . . . . . . . 2570 . . . . . . . . . 2580 . . . . . . . . . 2590

Sequence E L A K H E G F T D L L L E C G W R V A D W N S D R D A L E Q S V K S V M D V P T P R R Q M F K T F L A L Q N F A E S R K G D Q E V R K L C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T
S S
S
T T S T T T S T T T
S S
S S S
G G G T S

. . . . . . . . . 2600 . . . . . . . . . 2610 . . . . . . . . . 2620 . . . . . . . . . 2630 . . . . . . . . . 2640 . . . . . . . . . 2650 . . . . . . . . . 2660

Sequence D E G I Q L S L I K W V S L P I R Y T P A H K W L L H G F Q Q Y M E F L E A T Q I Y A N L H T T T V Q N L D S K A Q E I K R I L Q A W R D R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
T T S
S S
T T T S
G G G S

. . . . . . . . . 2670 . . . . . . . . . 2680 . . . . . . . . . 2690 . . . . . . . . . 2700 . . . . . . . . . 2710 . . . . . . . . . 2720 . . . . . . . . . 2730

Sequence L P N T W D D V N M W N D L V T W R Q H A F Q V I N N A Y L P L I P A L Q A Y R G Y H E I A W V I N R F A H V A R K H N M P D V C I S Q L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T S T T T S T T T
T T S S
T S S

. . . . . . . . . 2740 . . . . . . . . . 2750 . . . . . . . . . 2760 . . . . . . . . . 2770 . . . . . . . . . 2780 . . . . . . . . . 2790 . . . . . . . . . 2800

Sequence R I Y T L P N I E I Q E A F L K L R E Q A K C H Y Q N M N E L T T G L D V I S N T N L V Y F G T V Q K A E F F T L K G M F L S K L R A Y E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
S S S G G G S
G G G G G T T S T T T T T T
S S G G G S T T
T T

. . . . . . . . . 2810 . . . . . . . . . 2820 . . . . . . . . . 2830 . . . . . . . . . 2840 . . . . . . . . . 2850 . . . . . . . . . 2860 . . . . . . . . . 2870

Sequence A N Q A F A T A V Q I D L N L A K A W A Q W G F F N D R R L S E E P N N I S F A S N A I S C Y L Q A A G L Y K N S K I R E L L C R I L W L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S S
T T S G G G T T T S S S
S S
T

. . . . . . . . . 2880 . . . . . . . . . 2890 . . . . . . . . . 2900 . . . . . . . . . 2910 . . . . . . . . . 2920 . . . . . . . . . 2930 . . . . . . . . . 2940

Sequence S I D D A S G M L T N A F D S F R G E I P V W Y W I T F I P Q L L T S L S H K E A N M V R H I L I R I A K S Y P Q A L H F Q L R T T K E D F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
T T
S
T T T T G G G S S S S S S
T T T
T

. . . . . . . . . 2950 . . . . . . . . . 2960 . . . . . . . . . 2970 . . . . . . . . . 2980 . . . . . . . . . 2990 . . . . . . . . . 3000 . . . . . . . . . 3010

Sequence A V I Q R Q P W E Y L Q E L N N I L K T A Y P L L A L S L E S L V A Q I N D R F K S T T D E D L F R L I N V L L I D G T L N Y N R L P F P R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T
S S S S S S
S

. . . . . . . . . 3020 . . . . . . . . . 3030 . . . . . . . . . 3040 . . . . . . . . . 3050 . . . . . . . . . 3060 . . . . . . . . . 3070 . . . . . . . . . 3080

Sequence K N P K L P E N T E K N L V K F S T T L L A P Y I R P K F N A D F I D N K P D Y E T Y I K R L R Y W R R R L E N K L D R A S K K E N L E V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
G G G G S
S S S S T T T T T S
S S S T T S S
S

. . . . . . . . . 3090 . . . . . . . . . 3100 . . . . . . . . . 3110 . . . . . . . . . 3120 . . . . . . . . . 3130 . . . . . . . . . 3140 . . . . . . . . . 3150

Sequence C P H L S N F H H Q K F E D I E I P G Q Y L L N K D N N V H F I K I A R F L P T V D F V R G T H S S Y R R L M I R G H D G S V H S F A V Q Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T T T T T T T S
S
B
S S
S S S
T T
B
S
S S
T T S
S

. . . . . . . . . 3160 . . . . . . . . . 3170 . . . . . . . . . 3180 . . . . . . . . . 3190 . . . . . . . . . 3200 . . . . . . . . . 3210 . . . . . . . . . 3220

Sequence P A V R H S R R E E R M F Q L Y R L F N K S L S K N V E T R R R S I Q F N L P I A I P L S P Q V R I M N D S V S F T T L H E I H N E F C K K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T T S T T T T T T
S S S S
S S
B S

. . . . . . . . . 3230 . . . . . . . . . 3240 . . . . . . . . . 3250 . . . . . . . . . 3260 . . . . . . . . . 3270 . . . . . . . . . 3280 . . . . . . . . . 3290

Sequence K G F D P D D I Q D F M A D K L N A A H D D A L P A P D M T I L K V E I F N S I Q T M F V P S N V L K D H F T S L F T Q F E D F W L F R K Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T S S
S
S S S
T T T T T
S S T

. . . . . . . . . 3300 . . . . . . . . . 3310 . . . . . . . . . 3320 . . . . . . . . . 3330 . . . . . . . . . 3340 . . . . . . . . . 3350 . . . . . . . . . 3360

Sequence F A S Q Y S S F V F M S Y M M M I N N R T P H K I H V D K T S G N V F T L E M L P S D L S L P P D S P I F H N N E P V P F R L T P N I Q S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T S
S S S
S
S
S S S
S S
S S S S

. . . . . . . . . 3370 . . . . . . . . . 3380 . . . . . . . . . 3390 . . . . . . . . . 3400 . . . . . . . . . 3410 . . . . . . . . . 3420 . . . . . . . . . 3430

Sequence I G D S A L E G I F A V N L F T I S R A L I E P D N E L N T Y L A L F I R D E I I S W F S N L H R P I I E N P Q L R E M V Q T N V D L I I R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T S S S S S T T
S T

. . . . . . . . . 3440 . . . . . . . . . 3450 . . . . . . . . . 3460 . . . . . . . . . 3470 . . .

Sequence K V A Q L G H L N S T P T V T T Q F I L D C I G S A V S P R N L A R T D V N F M P W F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T
S S
S
T
S S
S S S
T T

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	S	L	T	E	Q	I	E	Q	F	A	S	R	F	R	D	D	D	A	T	L	Q	S	R	Y	S	T	L	S	E	L	Y	D	I	M	E	L	L	N	S	P	E	D	Y	H	F	F	L	Q	A	V	I	P	L	L	L	N	Q	L	K	E	V	P	I	S	Y	D	A	H	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S					T	T	G	G	G	G	S	S	S		S	S	G	G	G	G	G	G	T	T							T	T	T	S	S			S	S																	T	T						S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	E	Q	K	L	R	N	S	M	L	D	I	F	N	R	C	L	M	N	Q	T	F	Q	P	Y	A	M	E	V	L	E	F	L	L	S	V	L	P	K	E	N	E	E	N	G	I	L	C	M	K	V	L	T	T	L	F	K	S	F	K	S	I	L	Q	D	K	L	D	S	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T				S	S										T	T	T	T	T	T	S	S	S			S	S	S		S																T				S		T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	R	I	I	I	Q	I	Y	K	N	T	P	N	L	I	N	Q	T	F	L	R	S	S	M	F	S	F	K	I	L	S	E	C	P	I	T	M	V	T	L	Y	S	S	Y	K	Q	L	T	S	T	S	L	P	E	F	T	P	L	I	M	N	L	L	N	N	R	P	A	Y	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								G	G	G	T	S					S				S									T	T	T	S			S		S						T	T	S					S	S		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	F	I	L	A	Q	I	K	A	T	S	F	L	A	Y	V	F	I	R	G	Y	A	P	E	F	L	Q	D	Y	V	N	F	V	P	D	L	I	I	R	L	L	Q	D	C	P	S	E	L	S	S	A	R	K	E	L	L	H	A	T	R	H	I	L	S	T	N	Y	K	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	T	T	T	S	S					S		S	S	S											S			T	T																		S	S	T	T	S	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	L	P	K	L	D	Y	L	F	D	E	R	I	L	I	G	N	G	F	T	M	H	E	T	L	R	P	L	A	Y	S	T	V	A	D	F	I	H	N	I	R	S	E	L	Q	L	S	E	I	E	K	T	I	K	I	Y	T	G	Y	L	L	D	E	S	L	A	L	T	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T	T		S	G	G	G	G			T	T	T	T	T	S	S																	S	S																				T	T	S		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	M	S	A	K	L	L	L	N	L	V	E	R	I	L	K	L	G	K	E	N	P	Q	E	A	P	R	A	K	K	L	L	M	I	I	I	D	S	Y	M	N	R	F	K	T	L	N	R	Q	Y	D	T	I	M	K	Y	Y	G	R	Y	E	T	H	K	K	E	K	A	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T											S	G	G	G																																									T	T	T	S	S	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	K	N	S	I	Q	D	N	D	K	E	S	E	E	F	M	R	K	V	L	V	E	M	F	D	I	K	N	Y	A	P	I	L	L	L	P	T	P	T	N	D	P	I	K	D	A	F	Y	L	Y	R	T	L	M	S	F	L	K	T	I	I	H	D	L	K	V	F	N	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G		S				S														S	S	T	T	G	G	G	S	S				S					S																								G	G	G	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	N	E	Y	T	V	A	N	P	K	L	W	A	S	V	S	R	V	F	S	Y	E	E	V	I	V	F	K	D	L	F	H	E	C	I	I	G	L	K	F	F	T	K	D	A	R	E	L	M	D	Y	L	A	F	M	F	M	Q	M	D	N	A	T	F	N	E	I	I	E	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T		S		G	G	G	S	S	S	S																					G	G	G	G	G																T	T	T	S		T	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	L	P	F	V	Y	E	R	M	L	E	D	S	G	L	L	H	V	A	Q	S	F	L	T	S	E	I	T	S	P	N	F	A	G	I	L	L	R	F	L	K	G	K	L	K	D	L	G	N	V	D	F	N	T	S	N	V	L	I	R	L	F	K	L	S	F	M	S	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T		S	T	T									S	S		S																T	T	S	S	T	T	S	S																	T	T	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	F	P	N	I	N	E	V	V	L	L	P	H	L	N	D	L	I	L	N	S	L	K	Y	S	T	T	A	E	E	P	L	V	Y	F	Y	L	I	R	T	L	F	R	S	I	G	G	G	R	F	E	N	L	Y	R	S	I	K	P	I	L	Q	V	L	L	Q	S	L	N	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		S	S		G	G	G	T	S	S	S	S													T		S	S	T												T	T		S	S		S	G	G	G	S	T	T	S	S										T	T	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	M	I	L	T	A	R	L	P	H	E	R	E	L	Y	V	E	L	C	I	T	V	P	Y	L	P	F	L	M	K	P	L	V	F	A	L	Q	Q	Y	P	D	L	V	S	Q	G	L	R	T	L	E	L	C	I	A	E	Y	F	D	P	I	I	E	P	V	I	D	D	V	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T				S	S	S	S	S	S	S									S					S	S	T												S	S	S										T	T				T	T	T	T	T	S	G	G	G
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	A	L	F	N	L	L	Q	P	Q	P	F	N	H	A	I	S	H	N	V	V	R	I	L	G	K	L	G	G	R	N	R	Q	F	L	K	P	P	T	D	L	T	E	K	T	E	L	D	I	D	A	I	A	D	F	K	I	N	G	M	P	E	D	V	P	L	S	V	T	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S		S	S													S	S	S	S	S	T	T			S							S		T	T	T						B			B	T	T		S	S			B			S		S	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	I	Q	S	A	L	N	I	L	Q	S	Y	K	S	D	I	H	Y	R	K	S	A	Y	K	Y	L	T	C	V	L	L	L	M	T	K	S	S	A	E	F	P	T	N	Y	T	E	L	L	K	T	A	V	N	S	I	K	L	E	R	I	G	I	E	K	N	F	D	L	E	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S									S	S	S																				T	G	G	G	S				S	S		T	T							T	T	T	T		S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	V	N	K	R	D	Y	S	N	Q	E	N	L	F	L	R	L	L	E	S	V	F	Y	A	T	S	I	K	E	L	K	D	D	A	M	D	L	L	N	N	L	L	D	H	F	C	L	L	Q	V	N	T	T	L	L	N	K	R	N	Y	N	G	T	F	N	I	D	L	K	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T	S	T	T	T															T	T	T									T	T	T	T	S	S	S	S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	N	F	M	L	D	S	S	L	I	L	D	A	I	P	F	A	L	S	Y	Y	I	P	E	V	R	E	V	G	V	L	A	Y	K	R	I	Y	E	K	S	C	L	I	Y	G	E	E	L	A	L	S	H	S	F	I	P	E	L	A	K	Q	F	I	H	L	C	Y	D	E	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T				S			G	G	G	T	S	T	T	T	T			S	S	S	T																				S		S	S	S					S												G	G	G		S	S	T
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	Y	N	K	R	G	G	V	L	G	I	K	V	L	I	D	N	V	K	S	S	S	V	F	L	K	K	Y	Q	Y	N	L	A	N	G	L	L	F	V	L	K	D	T	Q	S	E	A	P	S	A	I	T	D	S	A	E	K	L	L	I	D	L	L	S	I	T	F	A	D	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	S	S	S	S		S					S														S			T	T	S		T	T	S	T	T	S	S											T	T	S	S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	E	E	D	L	G	N	K	V	L	E	N	T	L	T	D	I	V	C	E	L	S	N	A	N	P	K	V	R	N	A	C	Q	K	S	L	H	T	I	S	N	L	T	G	I	P	I	V	K	L	M	D	H	S	K	Q	F	L	L	S	P	I	F	A	K	P	L	R	A	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S				S	S											T	T	S		S	S	S	T													T	S	S	T	T				T	T	T	T	T	T	T	T	S	S	T	T	T						S		S	S		S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	F	T	M	Q	I	G	N	V	D	A	I	T	F	C	L	S	L	P	N	T	F	L	T	F	N	E	E	L	F	R	L	L	Q	E	S	I	V	L	A	D	A	E	D	E	S	L	S	T	N	I	Q	K	T	T	E	Y	S	T	S	E	Q	L	V	Q	L	R	I	A	C	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T							T	S	S	S				S	S	T	T												S			T	T	S				S	S	S		T	T	T			S	S
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	K	L	L	A	I	A	L	K	N	E	E	F	A	T	A	Q	Q	G	N	I	R	I	R	I	L	A	V	F	F	K	T	M	L	K	T	S	P	E	I	I	N	T	T	Y	E	A	L	K	G	S	L	A	E	N	S	K	L	P	K	E	L	L	Q	N	G	L	K	P	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	T	T	T	T	T	T	T	T	S	T	T											G	G	G		S																T	T	S			S		T	T	T					T	T
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Sequence	M	N	L	S	D	H	Q	K	L	T	V	P	G	L	D	A	L	S	K	L	L	E	L	L	I	A	Y	F	K	V	E	I	G	R	K	L	L	D	H	L	T	A	W	C	R	V	E	V	L	D	T	L	F	G	Q	D	L	A	E	Q	M	P	T	K	I	I	V	S	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S			S	S			S										T	T	S		S	S																	T	S	S						T	T	T	T	S		S	T	T	S
	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470
Sequence	N	I	F	H	L	L	P	P	Q	A	D	M	F	L	N	D	L	L	L	K	V	M	L	L	E	R	K	L	R	L	Q	L	D	S	P	F	R	T	P	L	A	R	Y	L	N	R	F	H	N	P	V	T	E	Y	F	K	K	N	M	T	L	R	Q	L	V	L	F	M	C	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S	S	S			S			S	S	S														T	T			S	S		S	S	S								T	S												S		S
	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540
Sequence	I	V	Q	R	P	E	A	K	E	L	A	E	D	F	E	K	E	L	D	N	F	Y	D	F	Y	I	S	N	I	P	K	N	Q	V	R	V	V	S	F	F	T	N	M	V	D	L	F	N	T	M	V	I	T	N	G	D	E	W	L	K	K	K	G	N	M	I	L	K	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S	T	T			T	T	T	T	T	G	G	G												T	S	T	T	T	S	S		S																	T		S	S		S	S	T	T	T		S	T	T
	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610
Sequence	D	M	L	N	L	T	L	K	T	I	K	E	N	S	F	Y	I	D	H	L	Q	L	N	Q	S	I	A	K	F	Q	A	L	Y	L	R	F	T	E	L	S	E	R	D	Q	N	P	L	L	L	D	F	I	D	F	S	F	S	N	G	I	K	A	S	Y	S	L	K	K	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S	S			S																				T	T	S	S			S	S									T	T	S	S	S	T	T	T		T	T	S	S
	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680
Sequence	F	H	N	I	I	A	S	S	N	K	E	K	Q	N	N	F	I	N	D	A	T	L	F	V	L	S	D	K	C	L	D	A	R	I	F	V	L	K	N	V	I	N	S	T	L	I	Y	E	V	A	T	S	G	S	L	K	S	Y	L	V	E	D	K	K	P	K	W	L	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S	S	T	T	T	T		T	T													S		T	T	S																						T	S	S	S	S		S			S	T	T					S
	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750
Sequence	L	H	N	K	I	W	K	N	S	N	A	I	L	A	Y	D	V	L	D	H	H	D	L	F	R	F	E	L	L	Q	L	S	A	I	F	I	K	A	D	P	E	I	I	A	E	I	K	K	D	I	I	K	F	C	W	N	F	I	K	L	E	D	T	L	I	K	Q	S	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T		S	S	S	S		S	S			S																				S	S	S													T	G	G	G	G		S	S	S	T	T
	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820
Sequence	L	V	T	S	Y	F	I	S	K	F	D	F	P	I	K	V	V	T	Q	V	F	V	A	L	L	R	S	S	H	V	E	A	R	Y	L	V	K	Q	S	L	D	V	L	T	P	V	L	H	E	R	M	N	A	A	G	T	P	D	T	W	I	N	W	V	K	R	V	M	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	S				S	T	T							T	T	S	S				T	T	S																		T	T	T	T	S
	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890
Sequence	N	S	S	S	Q	N	N	I	L	Y	Q	F	L	I	S	H	P	D	L	F	F	N	S	R	D	L	F	I	S	N	I	I	H	H	M	N	K	I	T	F	S	D	S	H	T	L	A	I	D	L	A	S	L	I	L	Y	W	E	N	K	T	L	S	L	H	L	R	E	A	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S	S								G	G	G	T	S	S		T	T					S													T	T				S
	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910	.	.	.	.	.	.	.	.	.	1920	.	.	.	.	.	.	.	.	.	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960
Sequence	T	A	F	L	I	R	Y	V	C	A	S	E	L	G	L	R	A	I	N	I	L	S	E	L	I	S	D	V	K	L	V	Y	F	E	K	F	S	E	N	I	L	Y	Y	C	M	N	A	L	D	V	L	Y	V	F	F	K	N	K	T	K	E	W	I	M	E	N	L	P	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T	T				S	G	G	G	G					T	T																	T	T	T	T				T	T	T
	.	.	.	.	.	.	.	.	.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.	.	.	.	.	.	2000	.	.	.	.	.	.	.	.	.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030
Sequence	Q	N	L	L	E	K	C	I	K	S	D	H	H	D	V	Q	E	A	L	Q	K	V	L	Q	V	I	M	K	A	I	K	A	Q	G	V	S	V	I	I	E	E	E	S	P	G	K	T	F	I	Q	M	L	T	S	V	I	T	Q	D	L	Q	E	T	S	S	V	T	A	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	T	T	G	G	G	T	S		T																	S			S	S	S	S		T	T															T	T			S	S	G	G	G	S
	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100
Sequence	T	L	A	W	V	L	F	M	N	F	P	D	N	I	V	P	L	L	T	P	L	M	K	T	F	S	K	L	C	K	D	H	L	S	I	S	Q	P	K	D	A	M	A	L	E	E	A	R	I	T	T	K	L	L	E	K	V	L	Y	I	L	S	L	K	V	S	L	L	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		S			S	T	T	T													T	T	S					S			S	S		S		S																			S						S
	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.	.	.	.	.	.	.	2150	.	.	.	.	.	.	.	.	.	2160	.	.	.	.	.	.	.	.	.	2170
Sequence	S	R	R	P	F	L	S	T	V	A	L	L	I	D	H	S	M	D	Q	N	F	L	R	K	I	V	N	M	S	R	S	W	I	F	N	T	E	I	F	P	T	V	K	E	K	A	A	I	L	T	K	M	L	A	F	E	I	R	G	E	P	S	L	S	K	L	F	Y	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S				S															T			S			S										G	G	G	G						T			T	T
	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.	.	.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.	.	.	.	.	.	.	2240
Sequence	V	L	K	L	F	D	Q	E	H	F	N	N	T	E	I	T	V	R	M	E	Q	P	F	L	V	G	T	R	V	E	D	I	G	I	R	K	R	F	M	T	I	L	D	N	S	L	E	R	D	I	K	E	R	L	Y	Y	V	I	R	D	Q	N	W	E	F	I	A	D	Y	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T		S	S		T	T	S		T	T	T	T	T	T	T	T	T	T	T	T	S	S															T	S	S				S									S	S						T	T	S	S
	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310
Sequence	W	L	N	Q	A	L	Q	L	L	Y	G	S	F	N	R	E	K	E	L	S	L	K	N	I	Y	C	L	S	P	P	S	I	L	Q	E	Y	L	P	E	N	A	E	M	V	T	E	V	N	D	L	E	L	S	N	F	V	K	G	H	I	A	S	M	Q	G	L	C	R	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T										T	T	B				S						S	S			S			S	S	G	G	G	S				S	S						S				S	S
	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380
Sequence	S	S	D	F	I	D	S	L	I	E	I	F	Y	Q	D	P	K	A	I	H	R	A	W	V	T	L	F	P	Q	V	Y	K	S	I	P	K	N	E	K	Y	G	F	V	R	S	I	I	T	L	L	S	K	P	Y	H	T	R	Q	I	S	S	R	T	N	V	I	N	M	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T					T	T		T	T														G	G	G			T	T	S													T		S	S							S	S	S	S	S	S	T
	.	.	.	.	.	.	.	.	.	2390	.	.	.	.	.	.	.	.	.	2400	.	.	.	.	.	.	.	.	.	2410	.	.	.	.	.	.	.	.	.	2420	.	.	.	.	.	.	.	.	.	2430	.	.	.	.	.	.	.	.	.	2440	.	.	.	.	.	.	.	.	.	2450
Sequence	D	S	I	S	K	I	E	S	L	E	L	P	P	H	L	V	K	Y	L	A	I	S	Y	N	A	W	Y	Q	S	I	N	I	L	E	S	I	Q	S	N	T	S	I	D	N	T	K	I	I	E	A	N	E	D	A	L	L	E	L	Y	V	N	L	Q	E	E	D	M	F	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S	S	S			S		S	S					T	T	S	S	S		S	T	T	T						T	G	G	G	T			S	S																				T		S
	.	.	.	.	.	.	.	.	.	2460	.	.	.	.	.	.	.	.	.	2470	.	.	.	.	.	.	.	.	.	2480	.	.	.	.	.	.	.	.	.	2490	.	.	.	.	.	.	.	.	.	2500	.	.	.	.	.	.	.	.	.	2510	.	.	.	.	.	.	.	.	.	2520
Sequence	L	W	R	R	R	A	K	Y	T	E	T	N	I	G	L	S	Y	E	Q	I	G	L	W	D	K	A	Q	Q	L	Y	E	V	A	Q	V	K	A	R	S	G	A	L	P	Y	S	Q	S	E	Y	A	L	W	E	D	N	W	I	Q	C	A	E	K	L	Q	H	W	D	V	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		S	S											T	T	T																S	S	S	S	S			G	G	G	T																	S		T	T	G	G	G
	.	.	.	.	.	.	.	.	.	2530	.	.	.	.	.	.	.	.	.	2540	.	.	.	.	.	.	.	.	.	2550	.	.	.	.	.	.	.	.	.	2560	.	.	.	.	.	.	.	.	.	2570	.	.	.	.	.	.	.	.	.	2580	.	.	.	.	.	.	.	.	.	2590
Sequence	E	L	A	K	H	E	G	F	T	D	L	L	L	E	C	G	W	R	V	A	D	W	N	S	D	R	D	A	L	E	Q	S	V	K	S	V	M	D	V	P	T	P	R	R	Q	M	F	K	T	F	L	A	L	Q	N	F	A	E	S	R	K	G	D	Q	E	V	R	K	L	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					S						T	T				S	S		S			T	T	S	T	T	T	S					T	T	T		S	S																				S	S	S					G	G	G	T	S
	.	.	.	.	.	.	.	.	.	2600	.	.	.	.	.	.	.	.	.	2610	.	.	.	.	.	.	.	.	.	2620	.	.	.	.	.	.	.	.	.	2630	.	.	.	.	.	.	.	.	.	2640	.	.	.	.	.	.	.	.	.	2650	.	.	.	.	.	.	.	.	.	2660
Sequence	D	E	G	I	Q	L	S	L	I	K	W	V	S	L	P	I	R	Y	T	P	A	H	K	W	L	L	H	G	F	Q	Q	Y	M	E	F	L	E	A	T	Q	I	Y	A	N	L	H	T	T	T	V	Q	N	L	D	S	K	A	Q	E	I	K	R	I	L	Q	A	W	R	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S		S	S			T																						T					S			S	S		T	T	T	S										G	G	G	S
	.	.	.	.	.	.	.	.	.	2670	.	.	.	.	.	.	.	.	.	2680	.	.	.	.	.	.	.	.	.	2690	.	.	.	.	.	.	.	.	.	2700	.	.	.	.	.	.	.	.	.	2710	.	.	.	.	.	.	.	.	.	2720	.	.	.	.	.	.	.	.	.	2730
Sequence	L	P	N	T	W	D	D	V	N	M	W	N	D	L	V	T	W	R	Q	H	A	F	Q	V	I	N	N	A	Y	L	P	L	I	P	A	L	Q	A	Y	R	G	Y	H	E	I	A	W	V	I	N	R	F	A	H	V	A	R	K	H	N	M	P	D	V	C	I	S	Q	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S																						T	S	T	T	T	S	T	T	T								T	T														S	S								T	S	S
	.	.	.	.	.	.	.	.	.	2740	.	.	.	.	.	.	.	.	.	2750	.	.	.	.	.	.	.	.	.	2760	.	.	.	.	.	.	.	.	.	2770	.	.	.	.	.	.	.	.	.	2780	.	.	.	.	.	.	.	.	.	2790	.	.	.	.	.	.	.	.	.	2800
Sequence	R	I	Y	T	L	P	N	I	E	I	Q	E	A	F	L	K	L	R	E	Q	A	K	C	H	Y	Q	N	M	N	E	L	T	T	G	L	D	V	I	S	N	T	N	L	V	Y	F	G	T	V	Q	K	A	E	F	F	T	L	K	G	M	F	L	S	K	L	R	A	Y	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S	S				S	S	S												G	G	G	S		G	G	G	G	G	T	T	S	T	T	T	T	T	T					S	S	G	G	G	S														T	T		T	T
	.	.	.	.	.	.	.	.	.	2810	.	.	.	.	.	.	.	.	.	2820	.	.	.	.	.	.	.	.	.	2830	.	.	.	.	.	.	.	.	.	2840	.	.	.	.	.	.	.	.	.	2850	.	.	.	.	.	.	.	.	.	2860	.	.	.	.	.	.	.	.	.	2870
Sequence	A	N	Q	A	F	A	T	A	V	Q	I	D	L	N	L	A	K	A	W	A	Q	W	G	F	F	N	D	R	R	L	S	E	E	P	N	N	I	S	F	A	S	N	A	I	S	C	Y	L	Q	A	A	G	L	Y	K	N	S	K	I	R	E	L	L	C	R	I	L	W	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S			T															T	S	S		T	T	S	G	G	G									T	T	T	S	S	S		S	S													T
	.	.	.	.	.	.	.	.	.	2880	.	.	.	.	.	.	.	.	.	2890	.	.	.	.	.	.	.	.	.	2900	.	.	.	.	.	.	.	.	.	2910	.	.	.	.	.	.	.	.	.	2920	.	.	.	.	.	.	.	.	.	2930	.	.	.	.	.	.	.	.	.	2940
Sequence	S	I	D	D	A	S	G	M	L	T	N	A	F	D	S	F	R	G	E	I	P	V	W	Y	W	I	T	F	I	P	Q	L	L	T	S	L	S	H	K	E	A	N	M	V	R	H	I	L	I	R	I	A	K	S	Y	P	Q	A	L	H	F	Q	L	R	T	T	K	E	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			S	S		T								T			S				T	T	T	T	G	G	G						S	S	S	S	S	S			T	T											T		T
	.	.	.	.	.	.	.	.	.	2950	.	.	.	.	.	.	.	.	.	2960	.	.	.	.	.	.	.	.	.	2970	.	.	.	.	.	.	.	.	.	2980	.	.	.	.	.	.	.	.	.	2990	.	.	.	.	.	.	.	.	.	3000	.	.	.	.	.	.	.	.	.	3010
Sequence	A	V	I	Q	R	Q	P	W	E	Y	L	Q	E	L	N	N	I	L	K	T	A	Y	P	L	L	A	L	S	L	E	S	L	V	A	Q	I	N	D	R	F	K	S	T	T	D	E	D	L	F	R	L	I	N	V	L	L	I	D	G	T	L	N	Y	N	R	L	P	F	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					S	S																		T				S	S																			S	S	S	S		S
	.	.	.	.	.	.	.	.	.	3020	.	.	.	.	.	.	.	.	.	3030	.	.	.	.	.	.	.	.	.	3040	.	.	.	.	.	.	.	.	.	3050	.	.	.	.	.	.	.	.	.	3060	.	.	.	.	.	.	.	.	.	3070	.	.	.	.	.	.	.	.	.	3080
Sequence	K	N	P	K	L	P	E	N	T	E	K	N	L	V	K	F	S	T	T	L	L	A	P	Y	I	R	P	K	F	N	A	D	F	I	D	N	K	P	D	Y	E	T	Y	I	K	R	L	R	Y	W	R	R	R	L	E	N	K	L	D	R	A	S	K	K	E	N	L	E	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S														G	G	G	G	S		S	S	S	S						T	T	T	T	T	S			S	S	S																	T	T	S	S		S
	.	.	.	.	.	.	.	.	.	3090	.	.	.	.	.	.	.	.	.	3100	.	.	.	.	.	.	.	.	.	3110	.	.	.	.	.	.	.	.	.	3120	.	.	.	.	.	.	.	.	.	3130	.	.	.	.	.	.	.	.	.	3140	.	.	.	.	.	.	.	.	.	3150
Sequence	C	P	H	L	S	N	F	H	H	Q	K	F	E	D	I	E	I	P	G	Q	Y	L	L	N	K	D	N	N	V	H	F	I	K	I	A	R	F	L	P	T	V	D	F	V	R	G	T	H	S	S	Y	R	R	L	M	I	R	G	H	D	G	S	V	H	S	F	A	V	Q	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T	T	T	T	T	T	T	S			S			B		S	S		S	S	S			T	T						B						S								S	S											T	T	S									S
	.	.	.	.	.	.	.	.	.	3160	.	.	.	.	.	.	.	.	.	3170	.	.	.	.	.	.	.	.	.	3180	.	.	.	.	.	.	.	.	.	3190	.	.	.	.	.	.	.	.	.	3200	.	.	.	.	.	.	.	.	.	3210	.	.	.	.	.	.	.	.	.	3220
Sequence	P	A	V	R	H	S	R	R	E	E	R	M	F	Q	L	Y	R	L	F	N	K	S	L	S	K	N	V	E	T	R	R	R	S	I	Q	F	N	L	P	I	A	I	P	L	S	P	Q	V	R	I	M	N	D	S	V	S	F	T	T	L	H	E	I	H	N	E	F	C	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T											T	T	T	T							S	T	T	T	T	T	T												S	S	S	S								S	S			B	S
	.	.	.	.	.	.	.	.	.	3230	.	.	.	.	.	.	.	.	.	3240	.	.	.	.	.	.	.	.	.	3250	.	.	.	.	.	.	.	.	.	3260	.	.	.	.	.	.	.	.	.	3270	.	.	.	.	.	.	.	.	.	3280	.	.	.	.	.	.	.	.	.	3290
Sequence	K	G	F	D	P	D	D	I	Q	D	F	M	A	D	K	L	N	A	A	H	D	D	A	L	P	A	P	D	M	T	I	L	K	V	E	I	F	N	S	I	Q	T	M	F	V	P	S	N	V	L	K	D	H	F	T	S	L	F	T	Q	F	E	D	F	W	L	F	R	K	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			T														T	T	S	S					S		S															S	S		T	T							T	T	T		S	S	T
	.	.	.	.	.	.	.	.	.	3300	.	.	.	.	.	.	.	.	.	3310	.	.	.	.	.	.	.	.	.	3320	.	.	.	.	.	.	.	.	.	3330	.	.	.	.	.	.	.	.	.	3340	.	.	.	.	.	.	.	.	.	3350	.	.	.	.	.	.	.	.	.	3360
Sequence	F	A	S	Q	Y	S	S	F	V	F	M	S	Y	M	M	M	I	N	N	R	T	P	H	K	I	H	V	D	K	T	S	G	N	V	F	T	L	E	M	L	P	S	D	L	S	L	P	P	D	S	P	I	F	H	N	N	E	P	V	P	F	R	L	T	P	N	I	Q	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	T						T	T	S					S	S	S						S								S		S	S	S		S	S						S	S	S	S
	.	.	.	.	.	.	.	.	.	3370	.	.	.	.	.	.	.	.	.	3380	.	.	.	.	.	.	.	.	.	3390	.	.	.	.	.	.	.	.	.	3400	.	.	.	.	.	.	.	.	.	3410	.	.	.	.	.	.	.	.	.	3420	.	.	.	.	.	.	.	.	.	3430
Sequence	I	G	D	S	A	L	E	G	I	F	A	V	N	L	F	T	I	S	R	A	L	I	E	P	D	N	E	L	N	T	Y	L	A	L	F	I	R	D	E	I	I	S	W	F	S	N	L	H	R	P	I	I	E	N	P	Q	L	R	E	M	V	Q	T	N	V	D	L	I	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S					T													S	S	S	S	S																					T	T						S	T
	.	.	.	.	.	.	.	.	.	3440	.	.	.	.	.	.	.	.	.	3450	.	.	.	.	.	.	.	.	.	3460	.	.	.	.	.	.	.	.	.	3470	.	.	.
Sequence	K	V	A	Q	L	G	H	L	N	S	T	P	T	V	T	T	Q	F	I	L	D	C	I	G	S	A	V	S	P	R	N	L	A	R	T	D	V	N	F	M	P	W	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T	T				S	S				S												T							S	S		S	S	S		T	T