Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5oj2B_

Fold library idPDB HeaderMoleculeTitle
c5oj2B_3.20PDB header: cell adhesionChain: B: PDB Molecule: mam domain-containing glycosylphosphatidylinositol anchor


Added to library: Sat Aug 26 11:52:08 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QGVYAPAQAQIIHAGQACERVYTIREGDTLVLQCLVTGHPRPQVRWTKTTSVLNETLRIEKIQRLQGGRY
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)

S

SS



TTS
S




SSSS

TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YCKAENGVGVPAIKSIRVDVQYLDEPVLTVHQTISDVRGSFYQEKTVFLRCTVNSNPPARFIWKRGAETL
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)
SSSS



TT

S

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SHSVDIYEPLYTQGETKVLKLKNLRPQDYASYTCQVSVRNVCSIPDKSITFQLTNTTAPPALKLSVNETL
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)





SSSSSS
S

GGG
S
TTGGG




TT
SS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence VVNPGDNVTXQCSLTGGDPQPEVLWSHSPGPLPPNSLVQGGNLTIWRIRVEDSGYYNCTAINNVGNPAKK
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)
TT

S

SSS

TT
SS
S

GGG

SBSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TVNLLVRSXKNATFQITPDVIKESETIQLGQDLKLSCHVDAVPQEKVVYSWYKNGKPARFSDLITRNDPE
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)



TTTT
SS

TTS
TTGGGTTB






S

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence LPPVTCSLEIIDLRFSDYGTYLCVATFQGAPIPDLSVEVNISSETVPPTISVPKGQSTITVREGSRAELQ
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) SSSS
SS

GGG
STT
SS


STT

STTTTTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence CEVRGKPKPPIIWSRVDKETPXPSGTXTVETYDGKLRLESVSRDXSGTYKCQTARYNGFNIRPREALVQL
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)
S


SSS



TTSSS
SS
SS

GGG

SSS
SS

 .........500.........510.........520.........530.........540.........550.........560
Sequence NVQFPPVVEPAFQDVRQGXGRSVTLRCTXLKGSPXKVATSVWRFNGTLLAQPPAEQQDYSELKVDSVSRE
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)
S

TT

S
S

TT



SS

TTSS
STT
 .........570.........580.........590.........600.........610.........620.........630
Sequence TSGSYECSISNDVGVSACLFQVSAKAYSPEFYYDTPNPTLSQKQSKNYSYILQWTQKEPDAVDPILKYRL
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) T

SS







SS


SSTTS
SSTTSSS


 .........640.........650.........660.........670.........680.........690..
Sequence EVRQLAQRNTIQTFIPVQKXEKGLLLEHILPNLKVPQSYEVRLTPITSFGAGDXAARIIRYX
Predicted secondary structure






























SS confidence





























































Known secondary structure (DSSP) TT
S





TT


SS

TT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D