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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ogeE_

Fold library idPDB HeaderMoleculeTitle
c5ogeE_3.22PDB header: membrane proteinChain: E: PDB Molecule: gdp-mannose transporter 1;


Added to library: Sat Nov 25 08:29:55 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SVANSGPISILSYCGSSILMTVTNKFVVNLKDFNMNFVMLFVQSLVCTITLIILRILGFRSLNKTDAKNW
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Known secondary structure (DSSP)

SSSTTTS




S
S






S
 .........80.........90.........100.........110.........120.........130.........140
Sequence FPISFLLVLMIYTSSKALQYLAVPIYTIFKNLTIILIAYGEVLFFGGSVTSMELSSFLLMVLSSVVATWG
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Known secondary structure (DSSP) S
T




T
 .........150.........160.........170.........180.........190.........200.........210
Sequence DQQAVAAAVASFNPGYFWMFTNCITSALFVLIMRKRIKLTNFKDFDTMFYNNVLALPILLLFSFCVEDWS
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Known secondary structure (DSSP)
S





TTSS
TTT
TTS


 .........220.........230.........240.........250.........260.........270.........280
Sequence SVNLTNNFSNDSLTAMIISGVASVGISYCSGWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPRNFLSI
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Known secondary structure (DSSP) TTSSS
TS




 .........290.........300....
Sequence LSIFIGFLSGIIYAVAKQKKQQAQ
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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