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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5oeiA_

Fold library idPDB HeaderMoleculeTitle
c5oeiA_1.78PDB header: transport proteinChain: A: PDB Molecule: uncharacterized protein family upf0065:tat pathway signal;


Added to library: Sat Nov 11 08:23:28 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DWPTRQVTLVVPFTSGGTTDMLARLIAARLSEHYGQSFVIDNRSGESGNIAASYVAKVPADGYTFIIGTP
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Known secondary structure (DSSP)


SS
SS
TTSTS



GGGTTS
SSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GIHATNRLVYRTMGYDPATDFTPVIVIARVPNLLSVTKSLPVTSVADLISYARQRPRELFYGVSALGSTG
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Known secondary structure (DSSP) TTGGGT
S

SS

TTS


STSTTT
SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence HLSTELFKTMTGVEITAVPYKGSAPMLRDLAEGRVHLTIDNLPASKPLLEAGEIRPLAVTTAKRWPPLSH
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Known secondary structure (DSSP) T



SSTSSSTTSSSSS

GGGTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LPTIAEAGVPGYETASWFTVGAPRGTPTEIVTSLNTTVAAFLGSDSGTVKLREIGAEPGGGSPQDMQRHV
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Known secondary structure (DSSP) S
BTTTTT
TT



TT

ST


 .........290.........
Sequence EAEIARWEKVAKTAGIAPL
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Known secondary structure (DSSP) T




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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