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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ocrC_

Fold library idPDB HeaderMoleculeTitle
c5ocrC_1.66PDB header: hydrolaseChain: C: PDB Molecule: kappa-carrageenase;


Added to library: Sat Oct 21 08:20:58 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QQPTKTSNPNDQWTIKWSASDEFNKNDPDWAKWIKTGNLPNTSAWKWNNQKNVKISNGIAELTMRHNANN
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Known secondary structure (DSSP)


S

S
TT


GGG
B


SSS

TTTB

SSS



SS

TT
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence TPDGGTYFTSGIFKSYQKFTYGYFEAKIQGADIGEGVCPSFWLYSDFDYSVANGETVYSEIDVVELQQFD
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Known secondary structure (DSSP)

BTTB

SS

TT
SS



TTS
TTSS


 .........150.........160.........170.........180.........190.........200.........210
Sequence WYEGHQDDIYDMDLNLHAVVKENGQGVWKRPKMYPQEQLNKWRAPWDPSKDFHIYGCEVNQNEIIWYVDG
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Known secondary structure (DSSP) TT

TT

TT
TTTS


SS
TTSS

SSTT
 .........220.........230.........240.........250.........260.........270........
Sequence VEVARKPNKYWHRPMNVTLSLGLRKPFVKFFDNKNNAINPETDAKAREKLSDIPTSMYVDYVRVWEKS
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Known secondary structure (DSSP)
SS

S

TTSTT

GGGSGGG
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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