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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5obuA_

Fold library idPDB HeaderMoleculeTitle
c5obuA_2.00PDB header: chaperoneChain: A: PDB Molecule: chaperone protein dnak;


Added to library: Sat May 12 10:29:06 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NGLIIGIDLGTTNSCVSVMEGGRPVVLENPEGKRTTPSIVSYKNNEIIVGDAAKRQMVTNPNTIVSIKRL
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Known secondary structure (DSSP)




SSTT


TTS
SS
TTTTTTTT
TT

GGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence MGTSNKVKVQNADGTTKELSPEQVSAQILSYLKDFAEKKIGKKISRAVITVPAYFNDAERNATKTAGKIA
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Known secondary structure (DSSP) TTS



TTS

TS



TT

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GLNVERIINEPTAAALAYGIDKASREMKVLVYDLGGGTFDVSLLDIAEGTFEVLATAGDNRLGGDDWDNK
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Known secondary structure (DSSP) T
TTGGGSSS

SS
TTTT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence IIEYISAYIAKEHQGLNLSKDKMAMQRLKEAAERAKIELSAQLETIISLPFLTVTQKGPVNVELKLTRAK
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Known secondary structure (DSSP) TTT


TT
TT
STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FEELTKPLLERTRNPISDVIKEAKIKPEEINEILLVGGSTRMPAVQKLVESMVPGKKPNRSINPDEVVAI
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Known secondary structure (DSSP) TTTT

GGG

SGGGGSSTT


B

S
TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence GAAIQGGVLRGDVKDVLLLDVTPLTLSIETLGGVATPLIKRNTTIPVSKSQIFSTAQDNQESVDVVVCQG
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Known secondary structure (DSSP) T







SB
SS
TTT
TT
BSSSSTT


S
 .........430.........440.........450.........460.........470.........480.........490
Sequence ERPMSRDNKSLGRFNLGGIQPAPKGKPQIEITFSLDANGILNVKAKDLTTQKENSITISSEEEIQKMIRD
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Known secondary structure (DSSP) S
SBGGGS






TT
S

TT

TTT



 .........500.........510........
Sequence AEANKERDNIIRERIELRNEGELEHHHH
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Known secondary structure (DSSP) TTT


SS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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