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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5oa30_

Fold library idPDB HeaderMoleculeTitle
c5oa30_4.30PDB header: translationChain: 0: PDB Molecule: eukaryotic translation initiation factor 2d;


Added to library: Sat Aug 12 08:27:24 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGTDQVSELVPGKEELNIVKLYAHKGDAVTVYVSGGNP
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Known secondary structure (DSSP)

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S
TS
TTS


TTS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ILFELEKNLYPTVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLPGLVMPPAGLPQVQKGDLCAISLVGN
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Known secondary structure (DSSP) SSS



GGGS


TTT

TSTT
B




TT

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHLWRSGNKSLQEQMDELLQQCFLHALKCRVKKADLP
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Known secondary structure (DSSP) SS

SS
TS
STTS
S


STTTTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LLTSTFLGSHMFSCCPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIVAVDWQPYHPPDIK
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Known secondary structure (DSSP) S

TT
S



GGGSS
SSTTTTTS
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 .........290.........300.........310.........320.........330.........340.........350
Sequence PLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAKKNDLVDADNKNLVRLDPILCDCILEKNEQHTV
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Known secondary structure (DSSP)

GGGTTTT

TT

TT
B
SS
TT

TS
STTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence MKLPWDSLLTRCLEKLQPAYQVTLPGQEPIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAA
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Known secondary structure (DSSP)
S
TTS

SS


TTT

GGGT

 .........430.........440.........450.........460.........470.........
Sequence ILQQRCQASTTVNPAPGAKDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALKPG
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Known secondary structure (DSSP) TS

SSSSS
S

TTS


GGG

TTSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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