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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5oa1V_

Fold library idPDB HeaderMoleculeTitle
c5oa1V_4.40PDB header: transcriptionChain: V: PDB Molecule: rna polymerase i-specific transcription initiation factor


Added to library: Sat Jul 29 08:21:44 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SDVLGSQLGVGVQVANRLDSQYDGTEIIAYASLNIAVLTRQNTNRHNNVTSIELHSPIKSIKIPGRSNLV
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S
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S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GIITENSFQIFRIESSEPLYFVEIDDLQVVDFAFNPDLQQFAIIDIKGNWSIGRIPIDNLHGTIFDPESS
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 .........150.........160.........170.........180.........190.........200.........210
Sequence WKRIEWFSHFQKILVFDRSKMIEIDFMNNWQTEVVQASNIRDYKRIDDKNGILLTSREIIIVGASPVRRI
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TTSSTTSSSS






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 .........220.........230.........240.........250.........260.........270.........280
Sequence SWKHDLDTTLRITVQKVLVAFVYSMRHKRIYMHVFSHEIPGGTPTGIETILTLDHIDVVDFLVKLRNSSE
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TTSBS





B
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TTT
 ........
Sequence VYYYALSN
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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