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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5o98A_

Fold library idPDB HeaderMoleculeTitle
c5o98A_1.55PDB header: oxidoreductaseChain: A: PDB Molecule: alcohol dehydrogenase 1;


Added to library: Sat Feb 24 08:44:28 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SEKYAVVTGSNKGIGFETCKKLASQGITVVLTARDEKRGLDALEKLKELGLSGKVLFHQLDVTDSSSVAS
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Known secondary structure (DSSP)


SS
SSTT
SSTTT
SS


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LAEFVKKQFGRLDILVNNAGVNGVITDDPADVDFSKIYKETYELAEECIQINYFGTKRTTDALLPLLQLS
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Known secondary structure (DSSP) SS
S




S



TT


TTS

TTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ASPRIVNISSIMGQLKNIPSEWAKGILGDASNLTEDRLDEVINNFLKDFKEGSLAAKGWPPSFSAYIVSK
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Known secondary structure (DSSP) SS


GGGSGGG


T
GGG

T
TTTTT

SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VVVNAYTRILAKKYPNFKINCVCPGFAKTDLNHGLGLLTAEEAAENPVKLALLPDDGPSGLFFDRSEESS
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Known secondary structure (DSSP)
TTS

SB
SGGGTT

SB
T

TT


S
TT
 ..
Sequence FE
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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