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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5nz8A_

Fold library idPDB HeaderMoleculeTitle
c5nz8A_3.00PDB header: hydrolaseChain: A: PDB Molecule: cellodextrin phosphorylase;


Added to library: Sat Aug 12 08:30:29 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MITKVTARNNKITPVELLNQKFGNKINLGNFADAVFTDAAFKNVAGIANLPMKAPVMQVLMENCIVSKYL
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Known secondary structure (DSSP)





SS
SS

TTTS


SSSSS


SS


SG
 .........80.........90.........100.........110.........120.........130.........140
Sequence KQFVPDRSVCFVEEGQKFYIVLEDGQKIEVPEDVNKALKATVSDVKHWAGYLTEDGEHVIDLLKPAPGPH
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Known secondary structure (DSSP) GGTTTTS

STTS
SSS


TSSGGGTT

TT

TTS

SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FYVNLLIGNRLGFKRTLQTTPKSVVDRFGRGSFRSHAATQVLATRFDMRQEENGFPANRQFYLYEDGKQI
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Known secondary structure (DSSP) TT



TTSS



TTS



STT

B

SS
TT

B
TTTT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence FYSALIDDNIVEATCKHSCNRTVIKYKTACNLEITRTIFLVPHKKGFPLATELQRIEIKNASDKARNLSI
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Known secondary structure (DSSP) TT


TTTTTT




TT

S
SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TYTGMFGTGAVHAIFEDVTYTNVIMQSAALYNDKGEFIGITPDYYPEEFKQDTRFVTMIVRNGDEKSFPQ
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Known secondary structure (DSSP) B

S
TT
T
TTS
SSGGGTSTT

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence SFCTDYNDFVGTGTLEHPAGGCNLNNKLNRKGPGFFALGAPFTVEPGKTVIIDTFTGLSSSKDNENYSDA
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Known secondary structure (DSSP)

TTS
SSS
SSSSS





SS



TT
TTTSSS

 .........430.........440.........450.........460.........470.........480.........490
Sequence VMLRELDNLLRYFEKSESVEETLNEIINFHENYGKYFQFNTGNKLFDSGFNRNLAFQVLYQTFMSRSFGQ
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Known secondary structure (DSSP) T
SSGGG

S
TTTS
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence TQKGYREIGFREIQDLFASMYYFINIGYQDFVKELLFEWTANANHNFYWVGKQPGLYSDDSLWLLQAYYR
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Known secondary structure (DSSP) S

S


GGGGTTT
T


SSSSB
STT
SSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence YIIYTKDTSVLDWNDCLKISVMNAFLLKLAIDHLAEIATLDQQMSELSKEVTDRIQKHAWKENFFARVLI
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Known secondary structure (DSSP) T

TT



TT





TTT
SB

 .........640.........650.........660.........670.........680.........690.........700
Sequence NRYYTYLGAKGDKLSADPNIDGVYFLNSFAWSVLSDVATDEQIAIMVDVIKKHLLTPYGLRLVTPADLNK
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Known secondary structure (DSSP)





BSSTT
S
BS
TT

S

BTT
S
TTTT
SB

B
GGG
 .........710.........720.........730.........740.........750.........760.........770
Sequence IGHYFFGDRENGAVFKHASMMAVAALIKAAKKVKDNELAKEMARIAYFMIDLVLPYKNLENPFQVAGNPR
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Known secondary structure (DSSP)


S
TTSTTTT

S
TTT
GGGGGSSBS
SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence ICTQYINTDTGENIGPLLSGTATWLNLNLISLAGIEYTRDGISFNPILREEETQLNFTLKAPKCSYKFSI
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Known secondary structure (DSSP) S

S
TTT



S

TT

TT





SS
STT
 .........850.........860.........870.........880....
Sequence TKPVGFARMESSEYELFVDGQKIDNTVIPMYTDEKEHIVTLKFK
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Known secondary structure (DSSP)

SS


TTTS
SS
B
SSS


SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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