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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5nz7A_

Fold library idPDB HeaderMoleculeTitle
c5nz7A_2.30PDB header: hydrolaseChain: A: PDB Molecule: cellodextrin phosphorylase;


Added to library: Sat Aug 12 08:30:54 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MITKVTARNNKITPVELLNQKFGNKINLGNFADAVFTDAAFKNVAGIANLPMKAPVMQVLMENCIVSKYL
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Known secondary structure (DSSP)





SS
SS

TTTS


SSSTT


SS


T
 .........80.........90.........100.........110.........120.........130.........140
Sequence KQFVPDRSVCFVEEGQKFYIVLEDGQKIEVPEDVNKALKATVSDVKHWAGYLTEDGEHVIDLLKPAPGPH
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Known secondary structure (DSSP) TTTTTTS
TTTTS


TTTGGGTT

TTS
TTS

SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FYVNLLIGNRLGFKRTLQTTPKSVVDRFGRGSFRSHAATQVLATRFDMRQEENGFPANRQFYLYEDGKQI
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Known secondary structure (DSSP) TT



TTSS



TTS



STT

B

SS
TT

B
TTTT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence FYSALIDDNIVEATCKHSCNRTVIKYKTACNLEITRTIFLVPHKKGFPLATELQRIEIKNASDKARNLSI
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Known secondary structure (DSSP) TT


TTTTTT




TT

S
SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TYTGMFGTGAVHAIFEDVTYTNVIMQSAALYNDKGEFIGITPDYYPEEFKQDTRFVTMIVRNGDEKSFPQ
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Known secondary structure (DSSP) B

S

T
TTS
SSGGGSSTT


 .........360.........370.........380.........390.........400.........410.........420
Sequence SFCTDYNDFVGTGTLEHPAGGCNLNNKLNRKGPGFFALGAPFTVEPGKTVIIDTFTGLSSSKDNENYSDA
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Known secondary structure (DSSP)

TTS
SSS
SSSSS





SS



TT
GGG
SS

 .........430.........440.........450.........460.........470.........480.........490
Sequence VMLRELDNLLRYFEKSESVEETLNEIINFHENYGKYFQFNTGNKLFDSGFNRNLAFQVLYQTFMSRSFGQ
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Known secondary structure (DSSP) T
STGGG

S
TTTS
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence TQKGYREIGFREIQDLFASMYYFINIGYQDFVKELLFEWTANVYKMGYANHNFYWVGKQPGLYSDDSLWL
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Known secondary structure (DSSP) S

S


GGGGTTT
TTB
TTS
BSSST
BSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence LQAYYRYIIYTKDTSVLNEEVPVADGNNEKRAVRETLKAIIQYSACISVGDHGLPLLDLADWNDCLKIAS
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Known secondary structure (DSSP)

GGGGG

TT
TT
TTSB
TTS
BB
BT
SS
TT



S
 .........640.........650.........660.........670.........680.........690.........700
Sequence NSIDGATKEKLYYEQLKKTNGKYGDRFMSDYSESVMNAFLLKLAIDHLAEIATLDNDTQLAQQMSELSKE
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Known secondary structure (DSSP) S


TTT

TTS






TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence VTDRIQKHAWKENFFARVLINRYKDGSYTYLGAKGDKLSADPNIDGVYFLNSFAWSVLSDVATDEQIAIM
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Known secondary structure (DSSP) TB
SSSB
S



TT
S

SSTT


BS
TT
SS

BTT
S
 .........780.........790.........800.........810.........820.........830.........840
Sequence VDVIKKHLLTPYGLRLVTPADLNKIANDTATGHYFFGDRENGAVFKHASMMAVAALIKAAKKVKDNELAK
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Known secondary structure (DSSP) TTT
SB

B
GGGTSSS




S
TTSTTTT

S
 .........850.........860.........870.........880.........890.........900.........910
Sequence EMARIAYFMIDLVLPYKNLENPFQVAGNPRICTQYINTDTGENIGPLLSGTATWLNLNLISLAGIEYTRD
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Known secondary structure (DSSP) TT
GGGGGSSBS
SSS

S
TTT



S
STTTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence GISFNPILREEETQLNFTLKAPKCSYKFSITKPVGFARMESSEYELFVDGQKIDNTVIPMYTDEKEHIVT
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Known secondary structure (DSSP)




TT

TT

SS


TTTS
TTSSS



SS
 ....
Sequence LKFK
Predicted secondary structure
SS confidence



Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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