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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5nxfB_

Fold library idPDB HeaderMoleculeTitle
c5nxfB_1.90PDB header: viral proteinChain: B: PDB Molecule: long-tail fiber proximal subunit;


Added to library: Sat Jul 15 08:24:36 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SETVTGTSANTAVSPKNLKWIAQSEPTWAATTAIRGFVKTSSGSITFVGNDTVGSTQDLELYEKNSYAVS
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Known secondary structure (DSSP)
T

S




T
GGGB

SSS

B




TTT
S
GGGS

SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence PYELNRVLANYLPLKAKAADTNLLDGLDSSQFIRRDIAQTVNGSLTLTQQTNLSAPLVSSSTGEFGGSLA
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Known secondary structure (DSSP) TTS

TTS

S

S
BTTB
GGGS

SSS




S




S



SS



SS



SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence ANRTFTIRNTGAPTSIVFEKGPASGANPAQSXSIRVWGNQFGGGSDTTRSTVFEVGDDTSHHFYSQRNKD
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Known secondary structure (DSSP)
SS





SSS



SSSTT

SS

STTS
SS




SS

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GNIAFNINGTVXPININASGLXNVNGTATFGRSVTANGEFISKSANAFRAINGDYGFFIRNDASNTYFLL
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Known secondary structure (DSSP) S
SS



S



SS




S



SS



SS




SSTT
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TAAGDQTGGFNGLRPLLINNQSGQITIGEGLIIAKGVTINSGGLTVNSRIRSQGTKTSDLYTRAPTSDTV
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Known secondary structure (DSSP)

TT
TTS


S


TTT


S




S




SS



SS



B



TTTTT



TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence GFWSIDINDSATYNQFPGYFKXVEKTNEVTGLPYLERGEEVKSPGTLTQFGNTLDSLYQDWITYPTTPEA
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Known secondary structure (DSSP) S


TTS


TTT





SSSSS



STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence RTTRWTRTWQKTKNSWSSFVQVFDGGNPPQPSDIGALPSDNATXGNLTIRDFLRIGNVRIVPDPVNKTVK
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Known secondary structure (DSSP)


GGGT




BTTB


T


SSS


S



SS
TTTTTT
 ....
Sequence FEWV
Predicted secondary structure
SS confidence



Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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