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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5nvaA_

Fold library idPDB HeaderMoleculeTitle
c5nvaA_2.26PDB header: membrane proteinChain: A: PDB Molecule: putative sodium:solute symporter;


Added to library: Sat Apr 7 08:34:24 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DFGFINYAVLFGYLAAMLLVGVYFSKRQKTADDYFRGGGRVPGWAAGVSVFATTLSSITFMSIPAKAYTS
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Known secondary structure (DSSP)


TT

SGGG




S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DWTFIIGQYLAIAILPLVFYFYIPFFRKLKITSAYEYLEARFDVRSRLFASLSFMLFHIGRVAIITYLTV
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Known secondary structure (DSSP)
SGGGTTTT
SSTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LALRPFMGIDPVVLIVLISLLCIIYTWMGGIEGVIWTDVIQGLLLSGGAVLIFIMICFKVDGGISEIFTT
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Known secondary structure (DSSP)
S
STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TAQADKFFPTTQWRWSWTDSTIPVLMIGFLFANIQQFTASQDVVQRYIVTDSIKETKRTLITNAKLVAII
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Known secondary structure (DSSP) TT
S

GGG
S

SSS

S
GGGSSSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PIFFFAIGSALFVYYQQNPSLLPAGFNTGGILPLFIVTEMPIGIAGLIIAAIFAAAQSSISSSLNSISSC
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Known secondary structure (DSSP)
GGGS
TT

GGGSS
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence FNSDIYTRLSKSSPSPEQKMKVAKLVIIVAGIFSSLAAIWLVLSSLIGLMGGPMTGLFMLGIFVKRANAG
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Known secondary structure (DSSP) TTTTT
SS





TGGGG
TT

 .........430.........440.........450.........460.........470..
Sequence SAVVGIIVSIIAVLAARYGSDLNFFFYGVIGSMSVVIAGTITAPLFAPAKQL
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Known secondary structure (DSSP) SS


TTGGGSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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