Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5nqaA_

Fold library idPDB HeaderMoleculeTitle
c5nqaA_1.90PDB header: transferaseChain: A: PDB Molecule: polypeptide n-acetylgalactosaminyltransferase 4;


Added to library: Sat Dec 23 08:39:16 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DLSRPLYKKPPADSRALGEWGKASKLQLNEDELKQQEELIERYAINIYLSDRISLHRHIEDKRMYECKSQ
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)
TT
BSS





TTSTTGGG







SS
TTS
TT







T
 .........80.........90.........100.........110.........120.........130.........140
Sequence KFNYRTLPTTSVIIAFYNEAWSTLLRTIHSVLETSPAVLLKEIILVDDLSDRVYLKTQLETYISNLDRVR
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)


TTTS

SS

SBTTT
S


GGGTTTSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LIRTNKREGLVRARLIGATFATGDVLTFLDCHCECNSGWLEPLLERIGRDETAVVCPVIDTIDWNTFEFY
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)
SS




SS

SS
TT
S
TT
TTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence MQIGEPMIGGFDWRLTFQWHSVPKQERDRRISRIDPIRSPTMAGGLFAVSKKYFQYLGTYDTGMEVWGGE
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP)


SS


TT





SSTTS

SS

SS
TTSS
TT

SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence NLELSFRVWQCGGKLEIHPCSHVGHVFPKNFLQNTARAAEVWMDEYKEHFYNRNPPARKEAYGDISERKL
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) TT






GGGSGGGGGS




 .........360.........370.........380.........390.........400.........410.........420
Sequence LRERLRCKSFDWYLKNVFPNLHVPEDRPGWHGAIRSRGISSECLDYNSPDNNPTGANLSLFGCHGQGGNQ
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) TT


T


-





TTSSSSTT



SS
TT
S



S

GGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence FFEYTSNKEIRFNSVTELCAEVPEQKNYVGMQNCPKDGFPVPANIIWHFKEDGTIFHPHSGLCLSAYRTP
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)

TT


SSS


TT

S



TTS


GGG


TTS
TTTT
T
 .........500.........510....
Sequence EGRPDVQMRTCDALDKNQIWSFEK
Predicted secondary structure











SS confidence























Known secondary structure (DSSP) TS



TT
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D