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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5npiB_

Fold library idPDB HeaderMoleculeTitle
c5npiB_2.00PDB header: viral proteinChain: B: PDB Molecule: single chain variable fragment of the non-neutralizing


Added to library: Sat May 27 09:08:09 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EVQLQQSGPELVKPGASLKISCKTSGYTFTDFTFHWVKLSHGPSLEWIGTIKPSNGDTAYNQKFKGKATL
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Known secondary structure (DSSP)





TT

SS
GGGS
TTT
TTT


GGGTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SVDKSASTAHIEFRSLTSEDSAVYFCARFGGSYPYAMDYWGQGTSVIVSSGTGASDIVLTQSPATLSVTP
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Known secondary structure (DSSP) TTTT
S

GGG
SSSS








TT



S
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GDRVSLSCRASQGIYNYVHWFQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVESEDFGM
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Known secondary structure (DSSP) T

SS

TT

TTS

TTT
TT

TTTTSS

GGG
 .........220.........230...
Sequence YFCQQTNKWPLTFGAGTKLELKA
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Known secondary structure (DSSP)
SSSS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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