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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5nopB_

Fold library idPDB HeaderMoleculeTitle
c5nopB_1.94PDB header: viral proteinChain: B: PDB Molecule: attachment glycoprotein;


Added to library: Sat Jul 22 08:21:42 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TIKPIEYPKPGCNRTGDHFTMEPGANFYTVPNLGPASSNSDECYTNPSFSIGSSIYMFSQEIRKTDCTAG
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STT

S


TTSS




TT
SSS
TTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EILSIQIVLGRIVDKGQQGPQASPLLVWAVPNPKIINSCAVAAGDEMGWVLCSVTLTAASGEPIPHMFDG
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SSSS

SSGGG
SS


B
TTS
B
TT



 .........150.........160.........170.........180.........190.........200.........210
Sequence FWLYKLEPDTEVVSYRITGYAYLLDKQYDSVFIGKGGGIQKGNDLYFQMYGLSRNQSFKALCEHGSCLGT
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Known secondary structure (DSSP)
TTS


GGGSS
BS


TTB
TT









SS
GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence GGGGYQVLCDRAVMSFGSEESLITNAYLKVNDLASGKPVIIGQTFPPSDSYKGSNGRMYTIGDKYGLYLA
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Known secondary structure (DSSP) T


TTT
GGGT



GGG
SS


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence PSSWNRYLRFGITPDISVRSTTWLKSQDPIMKILSTCTNTDRDMCPEICNTRGYQDIFPLSEDSEYYTYI
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Known secondary structure (DSSP)

SS

S

SSS
GGG





S


SSB




TTT



S

B


SSTTSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence GITPNNGGTKNFVAVRDSDGHIASIDILQNYYSITSATISCFMYKDEIWCIAITEGKKQKDNPQRIYAHS
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Known secondary structure (DSSP) TT
TTS

TTSS
TTSSTTS

 .........430....
Sequence YKIRQMCYNTVTVG
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Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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