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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5nmrA_

Fold library idPDB HeaderMoleculeTitle
c5nmrA_2.10PDB header: protein transportChain: A: PDB Molecule: sortilin;


Added to library: Sat Dec 9 08:32:35 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence CGRLPDFIAKLTNNTHQHVFDDLSGSVSLSWVGDSTGVILVLTTFQGQSKLYRSEDYGKNFKDITNLINN
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Known secondary structure (DSSP)



S
TTTT
S

SSSSS


SSTTS


GGGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TFIRTEFGMAIGPENSGKVILTAEVSGGSRGGRVFRSSDFAKNFVQTDLPFHPLTQMMYSPQNSDYLLAL
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Known secondary structure (DSSP)

B
GGG

STT





TT
SS
SSTTS


SS
BSS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence STENGLWVSKNFGEKWEEIHKAVCLAKWGPNNIIFFTTHVNGSCKADLGALELWRTSDLGKTFKTIGVKI
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Known secondary structure (DSSP) BTT

SSTTSS
SS
GGG

SSS
TTTTTTSSSTTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence YSFGLGGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAANEDMVFMHVDEPGDTGF
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Known secondary structure (DSSP) TT
SSSS
SSTTSS

SS

B
TT


SS

SSSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence GTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYITSTLSEDNSIQSMITFDQGGRWEHLRKP
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Known secondary structure (DSSP)
TTS

B
STT

B


TTSTT

TTS
SSTTS

B


 .........360.........370.........380.........390.........400.........410.........420
Sequence ENSKCDECSLHIHASYSISQKLNVPMAPLSEPNAVGIVIAHGSVGDAISVMVPDVYISDDGGYSWAKMLE
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Known secondary structure (DSSP) SS







TT
S




B

TTSTT
SS


S

SSSSSS
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence GPHYYTILDSGGIIVAIEHSNRPINVIKFSTDEGQCWQSYVFTQEPIYFTGLASEPGARSMNISIWGFTE
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Known secondary structure (DSSP) S
GGGT

SS
B
SSTTSS


SS
B

TTS

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence SFITRQWVSYTVDFKDILERNCEEDDYTTWLAHSTDPGDYKDGCILGYKEQFLRLRKSSVCQNGRDYVVA
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Known secondary structure (DSSP)
SS

TTTS
SB

GGGTT
S
TTSTTTT
BTT
TT


B

TT



 .........570.........580.........590
Sequence KQPSVCPCSLEDFLCDYRKIPGDKCQGGMN
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Known secondary structure (DSSP)

B
GGG



TT



SB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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